KEGG   Xenopus laevis (African clawed frog): 446596
Entry
446596            CDS       T01010                                 
Symbol
rbm5.S, g15, h37, luca15, rbm5, rbm5-a, rbm5-b, rmb5
Name
(RefSeq) RNA-binding protein 5-B
  KO
K13094  RNA-binding protein 5/10
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xla03041]
    446596 (rbm5.S)
Spliceosome [BR:xla03041]
 Complex A
  Other components
   Complex A specific factors
    446596 (rbm5.S)
SSDB
Motif
Pfam: G-patch OCRE RRM_1 zf-RanBP G-patch_2 GSIII_N SAGA-Tad1
Other DBs
NCBI-GeneID: 446596
NCBI-ProteinID: NP_001086761
Xenbase: XB-GENE-6256678
UniProt: Q6DDU9 A0A974D2Z1
Position
4S:complement(105114616..105135463)
AA seq 749 aa
MGSDKRVSRSERSGRYGSAFDRDDRDDRDSRSRRRDSEYKRYRDERNDQYDDYRDYESPE
RERMRDRERRNSDRSEDGYHSDGDYMDHDYRQDYYMDEKESKTIMLRGLPININENDIRE
LVESFEGPQPADVRLMKRKTGLSRGFAFVEFYHLQDATRWMEANQKKLVIQGKTIAMHYS
NPRPKFEDWLCNKCGLYNFRRRLKCFRCGAAKAESDMEAPSGSSETPQSADYYSDSGYVS
SAIILRNIGPHTVVDSILSALAPYVSLVVSNIRLIKDKQTQQNRGFAFVQLPSALEASQL
LQILQTLHPPLKIDGKTIGVDFAKSARKDLVLPDGHRVSAFSVASTAIAAAQWSATQPAQ
QSGEAGDYAYLQQGQEGNSNFGQCSQDYQPFYQTQTAAVDQDTAPQSEGSPVPATTSAVV
CQSPQMYQQPGSPTQSGTSTAASTTPASTTSTEEATTPTAIVPGVKYSVPDTSTYQYDES
SGYYYDPQTGLYYDPNSQYYYNSLTQQYLYWDGEKQTYLPAADGTGQSGAQPNGANPGTS
KEGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPLSSRDEERKESAAADAGF
ALFEKKQGALFERQFLPDMMMMMVNTEEEKPPNAKYRDRAAERREKYGIPEPPEPKRKRF
DPTVVNYEQPTKDGIDNSNIGNKMLQAMGWKEGSGLGRKSQGITAPIQAQVRMRGAGLGA
KGSSYGVNTSDSYKDAVKKAMFARFSEME
NT seq 2250 nt   +upstreamnt  +downstreamnt
atgggatcagataaacgtgtgagtcgcagtgagcggagtggaagatatggttcagcgttt
gatagagatgatcgtgatgatagagacagtaggagccggcgcagagattctgaatacaaa
agataccgagatgagcgtaacgaccaatatgatgactacagagattatgaaagtcctgag
cgtgaaagaatgcgtgaccgagagaggaggaacagtgatcgatctgaagatggctatcat
tcagatggtgactatatggaccatgactaccgccaggactattacatggatgaaaaagag
agcaagacaatcatgctaaggggcttacccattaatattaatgagaatgatattcgtgag
ctggtggagtcttttgaagggccgcagcctgctgatgtgcggctgatgaagagaaagaca
ggtttaagccgcggtttcgccttcgtggagttttatcacttgcaagatgctacccgctgg
atggaagccaatcagaaaaagcttgtaatccagggaaagactatcgccatgcattacagc
aatccacgacccaaatttgaggactggctgtgtaacaagtgtggcctgtacaactttcgt
cgaagactaaaatgcttccgctgtggggcagccaaggctgaatctgatatggaagcccca
tcaggatcatctgaaactcctcagtctgctgattactatagtgacagtggctatgtatcc
tcagccataatccttcggaatattggaccccacactgtagtggattccatcttatctgca
cttgctccctatgtctcacttgtggtcagcaacatccgccttattaaggacaagcaaacc
cagcagaaccgaggctttgcatttgtgcagcttccttcagctctggaggcatcacagctc
ctacaaattctacagactctgcatccccctctcaaaattgatgggaaaactattggtgtg
gattttgcaaaaagcgctagaaaggatcttgtgttgccagatgggcacagagttagtgca
ttctctgtggcaagcaccgctattgctgctgcacagtggtctgccactcagccggctcag
caaagtggtgaagctggggattatgcatacctgcagcaaggacaggaaggcaattctaat
tttggacaatgctcccaagattaccaaccattttaccaaacacagactgcagcggtagac
caagacacggcaccacaatcggagggttctccagtaccagcaactacaagtgcagtggtg
tgtcaaagtcctcagatgtaccagcaacccggttctccgacccagtctggtacaagtaca
gctgccagcacaactccagcatctactactagcacagaagaagcaaccactcctactgcc
attgttcctggagtaaaatactctgttccagatacttccacgtatcaatatgacgagagc
tcaggatattactatgatccgcaaactggcctttactatgatcccaattctcagtattac
tacaactcactgactcagcagtatctatattgggatggtgaaaaacagacgtacttgcca
gctgctgatggaacaggacaaagtggagcacaacccaatggtgcaaatccaggcacttcc
aaggaaggcaaagagaaaaaagaaaaaccaaaaagcaagacagctcaacagattgcaaag
gatatggagagatgggccaaaagtttaaacaaacagaaggaaaatttcaagaacagcttc
cagccactcagttctcgtgatgaagagagaaaagagtcggcggcagcagatgctggattc
gctttgtttgagaaaaagcaaggagcattgtttgagagacagtttctaccagatatgatg
atgatgatggtgaacactgaggaagaaaagcctccaaatgcaaaatacagagaccgggca
gcagaaagaagagagaaatatggcattccagagcccccagaacccaaacgcaagcgattc
gaccctactgtggtgaattatgagcaacctacgaaggatggaattgataacagcaatata
ggaaataagatgctgcaagccatgggttggaaggagggctctggactgggccgaaagagt
caaggaattacagctcctattcaggctcaagtcagaatgagaggggccggtctgggagcc
aaaggcagttcatatggagtaaacacatcagactcttacaaggatgcagtgaaaaaggca
atgtttgcacgcttctcagaaatggaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (7)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (46)   

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