KEGG   Xenopus laevis (African clawed frog): 733148
Entry
733148            CDS       T01010                                 
Symbol
riok1.L, riok1
Name
(RefSeq) RIO kinase 1 L homeolog
  KO
K07178  RIO kinase 1 [EC:2.7.11.1]
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    733148 (riok1.L)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:xla01001]
    733148 (riok1.L)
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:xla03009]
    733148 (riok1.L)
Enzymes [BR:xla01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     733148 (riok1.L)
Protein kinases [BR:xla01001]
 Serine/threonine kinases: Other
  RIO family [OT]
   733148 (riok1.L)
Ribosome biogenesis [BR:xla03009]
 Eukaryotic type
  Pre-40S particles
   Kinases
    733148 (riok1.L)
SSDB
Motif
Pfam: RIO1 NRDD
Other DBs
NCBI-GeneID: 733148
NCBI-ProteinID: NP_001116165
Xenbase: XB-GENE-866132
UniProt: B1H1X7 A0A974CND0
Position
6L:94010459..94042130
AA seq 542 aa
MSDSEGIESYESFLMRKEQASLQEEGANKEDSEDEEQDEDDDWYWDGTDTNFKHYSATRS
SNPQANRNNIQSGSSKTYTVSDKVLQKYENKINLGKLYISESVFNKVSEKSRQKESDTYR
VKDKSDRATVEQVLDPRTRMILFKMLTRGVISEINGCISTGKEANVYHASTSSGDNRAIK
IYKTSILMFKDRDKYVSGEFRFRHGYCKGNPRKMVKTWAEKEMRNLIRLNTAGIPCPEPI
MLRSHVLVMGFIGKNDMPAPLLKNAQLSDSKARELYLDIIQYMRRMYQDARLVHADLSEF
NMLYNNGNVFIIDVSQSVEHDHPHALEFLRKDCANINDFFVKYDVAVMTVRELFEFITDP
SITKDNMDAYLEKIMEIAAERTEEERSSQDKVDEEVFKKAYIPRTLNEVKNFERDVDTMQ
KLKEEDMSLNTQQDNILYQTVTGLKKDLSGAETVPALLQNSNNEDQLGSDSDDDDDNDDG
AKDSASDSDEDIHPKNQGSQPEVDKKERKKTVKEAQREKRKNKVPKHVKKRKEKVAKMKK
GK
NT seq 1629 nt   +upstreamnt  +downstreamnt
atgtcagacagtgaaggaatagaaagttatgaaagcttcctcatgagaaaagagcaggca
tcacttcaggaggaaggagccaacaaagaggacagtgaggatgaggagcaggatgaggat
gatgattggtactgggatggtactgatacaaactttaagcattattcagctacaaggagc
agtaatccacaggccaacagaaataacatacagagtggttcttctaaaacctacactgtg
tcagacaaagttttacagaagtatgaaaataaaatcaatttgggtaaactttatatttcg
gaatctgttttcaataaagtcagtgaaaaatccaggcagaaggagtccgatacgtaccgg
gttaaagataaatctgacagagcaaccgtggagcaggtattggatcctaggactcgaatg
attctttttaagatgcttacaaggggagtcatatccgaaatcaatggctgtatcagcact
ggcaaagaagcaaatgtttaccacgctagcacttcatctggagataacagagcaatcaaa
atttacaagacttctatactgatgtttaaggatcgtgataaatatgtgagtggggaattc
agatttcgtcatggctactgcaaaggaaatccaaggaaaatggtgaaaacatgggcagaa
aaagaaatgagaaacttaataaggctgaacaccgcagggatcccttgcccagagcctatc
atgttgcgaagccatgtgcttgttatgggatttattgggaaaaatgacatgcctgctcct
cttctaaaaaatgctcagctgtctgactccaaagcaagagagctttaccttgatattata
caatatatgaggagaatgtaccaggatgccaggcttgtacatgccgatctcagtgaattt
aacatgctgtataacaatggaaatgttttcataatcgatgtatctcagtcagtggaacat
gatcaccctcatgccttggagttccttcgaaaggattgcgctaacattaacgatttcttt
gtcaagtatgacgttgcagtaatgactgtgcgtgagctgtttgaatttataacagaccca
tcgatcaccaaggacaacatggatgcttacttggagaagataatggagatagctgctgaa
cggacagaagaagagagatctagccaagataaggttgacgaagaggtgttcaagaaggca
tatattcctagaactctaaatgaggttaaaaattttgagagagatgtagatacaatgcag
aagctgaaagaggaagacatgtcccttaacacacaacaagataatattctctaccagaca
gtgactggactgaagaaagacttatcgggtgctgaaacggttccagccttgcttcagaac
agtaacaatgaagatcagctgggatcagactccgatgatgatgatgataatgatgatggt
gcgaaagattctgcatcagattcagatgaagacatacatcccaaaaatcaggggtctcag
ccagaagtggataaaaaggaaagaaaaaagacagttaaagaagcccagcgagaaaagaga
aaaaacaaggttccaaagcatgtgaagaaaagaaaagagaaagtagcaaaaatgaagaaa
gggaaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (8)   
   UniProt (2)   
   RefSeq(pep) (6)   
DNA sequence (14)   
   RefSeq(nuc) (6)   
   GenBank (4)   
   EMBL (4)   
Protein domain (2)   
   Pfam (2)   
All databases (53)   

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