KEGG   Xenopus laevis (African clawed frog): 734465
Entry
734465            CDS       T01010                                 
Symbol
sf3b2.L, cus1, sap145, sf3b145, sf3b150, sf3b2
Name
(RefSeq) splicing factor 3b subunit 2 L homeolog
  KO
K12829  splicing factor 3B subunit 2
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    734465 (sf3b2.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xla03041]
    734465 (sf3b2.L)
Spliceosome [BR:xla03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    734465 (sf3b2.L)
 Complex B
    734465 (sf3b2.L)
 Complex C
   U2 SnRNP specific factors
    734465 (sf3b2.L)
SSDB
Motif
Pfam: DUF382 PSP
Other DBs
NCBI-GeneID: 734465
NCBI-ProteinID: NP_001089415
Xenbase: XB-GENE-5875890
UniProt: Q52KT1
Position
4L:complement(31361822..31396164)
AA seq 764 aa
MAETADGSKEDMMDHTSQQVRDDVEISSTAVRLAQMAGMPLPTLQAPPPPPGLGRGFPIG
LPPCIPTDTEGAKQSQGPPVSLQPKATLIDQEVSTTRSPLLPRGTLPITTSITPLMSSTN
RPRVQSQPSGEDSKEADDSSAGPKIPQVLEKILQLKELRQEELVSLPATTEEEDIDADFR
YGNTALEAEEDNSVLSKKEKKNRRRRNRKKRTHKRTVATEPAVVDELNEAAEPDLAGGKL
EIEYVTEEPDIYDPNFIFFKRIFQAFKLTDDVKREKEKEPEKVEKIEPAVPRKRFEEELM
DDDSDSDADEKKLDAPKLSKKKLRRMNRFTVAELKQLVSRPDVVEMHDVTAPDPKLLVHL
KGTRNSVPVPRHWCFKRKYLQGKRGIEKPPFQLPDFIKRTGIQEMREALQEKEEQKTMKS
KMREKVRPKMGKIDIDYQKLHDAFFKWQSKPKLTIHGDLYYEGKEFETRLKEKKPGDLSD
ELRITLGMPVGLNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNSPIPEGCSFGYHAGGWG
KPPVDEMGKPLYGDVFGTNASDFQSKNEEEDIDRTPWGELELSDDESSSEEEEDESDEDK
PDETGFITPADSGLITPGGFSSVPAGMETPELIELRKKKIEEAMDGTETPQLFTVLPEKR
TATVGGAMMGSTHIYEMATAMSRRGIATEPQGVEIALAPEELELDPSAMTQKYEERVREA
QEQVQKEDFSDMVAEHAAKQKQKKRKGQPQDSRAGGKKYKEFKF
NT seq 2295 nt   +upstreamnt  +downstreamnt
atggcggaaactgcagatggaagtaaagaggatatgatggatcatacttctcaacaggtt
cgggatgatgttgaaatatcctctactgctgttagattggcacagatggctgggatgcct
ctacctacacttcaggcaccacctccaccccctggtctcggaagaggttttccaataggc
ttgcctccttgcatccctactgacactgaaggggcaaagcagtcacaagggccacctgtt
tcactgcagccaaaggcgacccttattgatcaggaagtctctaccacacggtccccactt
ctgcctagaggtacccttcccattacaacttcaatcacaccattgatgtcctccacaaac
cgccctcgagtccagtcacaaccttctggagaggattccaaagaagcagatgatagttca
gcaggaccaaaaatccctcaggttcttgaaaagattcttcagcttaaggagctcaggcag
gaagaacttgtatctttgccagcaactactgaggaggaagatattgatgcagactttcgt
tatggtaatacagctttagaagccgaagaggataatagtgtcctaagtaaaaaagagaaa
aaaaatcgaaggaggagaaatcgaaagaagcgaacacataaaagaacggttgccacagaa
cctgccgtagttgatgagcttaatgaagctgcagaacctgatcttgcgggtgggaaactg
gagatagagtatgtgacagaagaaccggatatctatgatcccaactttatattttttaag
agaatctttcaggcctttaagctgacagatgatgtaaaacgggagaaagagaaggagcct
gaaaaggtggagaaaattgaaccagccgttccaagaaaacgatttgaggaggaactaatg
gatgatgacagcgacagtgatgcagatgagaaaaagctagatgctcccaaattgtctaag
aaaaaattgagaagaatgaacagatttacagtggctgaactaaaacagttggtatcacga
ccagatgtggtagaaatgcatgatgttactgctccagaccccaaactacttgttcatctg
aaaggaactcgaaattctgttcctgttccacgacactggtgttttaaacgaaaatatctg
caaggaaaaaggggtattgaaaaacctcctttccagctgcctgacttcatcaagagaaca
ggcatacaggagatgagggaagctttacaggaaaaggaagagcaaaaaactatgaaatct
aaaatgagggaaaaggtgagaccgaagatgggaaaaattgacattgactatcaaaagttg
cacgatgcatttttcaaatggcagagcaaacccaagcttaccattcatggagatttatat
tatgaggggaaggagtttgagacccgcctgaaggagaaaaaaccaggtgacctctctgat
gagctaaggattactttgggcatgcctgtgggtctgaatgcccataaagtgccccctccc
tggcttattgcaatgcagagatacggaccacccccctcctaccccaaccttaaaatacca
gggctcaactcccccataccagagggatgctcctttggatatcatgctggaggttgggga
aaacctcctgtggatgaaatggggaaacctctttatggtgatgtgtttgggaccaatgcc
tcagatttccagagcaaaaatgaagaagaagatatagacagaaccccttggggagaacta
gaactatcagatgacgaatcctcttcagaggaagaagaagatgagagtgatgaagataaa
cctgatgaaactggttttattaccccagcagacagtggtttaattaccccgggaggcttt
tcgtctgtccctgctggcatggagacgcctgaactgatagagttgaggaaaaagaagatt
gaggaagccatggatggaactgagacaccacaactctttactgtacttccagaaaagaga
actgctactgtgggtggagctatgatgggctccacccacatctatgagatggccacggcc
atgtctcgcagaggtatcgccactgagccacagggcgtagaaatcgctctggcccctgaa
gaattagaattggatccatcagcaatgacccagaaatatgaggaacgtgtaagggaagct
caggaacaggtacagaaagaagacttcagtgacatggtggcagaacatgcagctaaacaa
aagcaaaagaagcggaaggggcaaccacaggattcacgagcaggtggcaagaaatacaag
gagttcaagttctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system