KEGG   Xiphophorus maculatus (southern platyfish): 102217374
Entry
102217374         CDS       T02923                                 
Symbol
nup214
Name
(RefSeq) nuclear pore complex protein Nup214 isoform X4
  KO
K14317  nuclear pore complex protein Nup214
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:xma00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102217374 (nup214)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xma03019]
    102217374 (nup214)
Messenger RNA biogenesis [BR:xma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102217374 (nup214)
SSDB
Motif
Pfam: Nup214_FG ANAPC4_WD40 WD40 NUP214
Other DBs
NCBI-GeneID: 102217374
NCBI-ProteinID: XP_014328398
Ensembl: ENSXMAG00000011331
UniProt: M4AA87
Position
8:16647595..16675442
AA seq 1990 aa
MGDDADSPPEREMKDFQFRQMKKVQVFEAAEDMPKDRSSLLTVSNKYGLTFVGLGRTFKV
YLTLNILAADKADGSSYEVVKGIPALVEVTGDMSLHHLALSCDELTLSVCGTSEETGLSI
AFYDVRTFINKARPQKSPFASLQPAVTSDALVQDLKWNPAQPSMLAACLSDGSMMILEVI
DSVKIQAQLPANSGVTCLSWSPKGKQVAVGKMNATVSQYTPALEEKRIIPCPPFYNSDDP
VKALDVLWLRTPVFAVAYAYADGCLETPPELVLISLPKKDEKVEPKYLNFGESVFGSCTE
RQHHYFLSHIEDWDLMLAASAASIEVSVIARQDDRMWEVWLLEDASRAELPVTETNDDTL
PLGLAIDYTSQQEIQITDEKTLPPAPTMLMLSTEGVLCPFALLNLNPGVKQLVSPFTALT
LEGERQPKPVSLAAQPAKTAASAGSAPAAFPNIALASVSSASSAPASSAPAASSLAVPFN
FVPTAPVSSSSSEFTFSVPTTHATTTLPPAFSLGGSGPFSSVSSSFSFASKPPSETPSSA
SAFSFSTPSMKPAAPAPAPVSTPQSLPPASLPSVKLNLNDRFTSGETPAPAFSFNSTLPK
AAASSSSTASTLSLPATKPPVVLTPVRPVQTGTPPSAVQKPAPTTQGRTQPPQATVSMKT
LEKQLQQKKESDPIMTGILEEIAHFQKELDDLKSRSTKADFKVGTNDGMKDLRKESEDLH
IFTLEIKETTESLHGDIGTLKTTLIEGFAGAEEAKTQSELSKDKNYRQLLYKKSLDPRSE
EQLKEIRRLYQYVTSAVEDVNDVLDVEWEKHLEKKKKQKHMVVPGREGLFTTLSNNIYII
NQQKNRLDQLVQELTSLRLYSKNAAPSISQNIATGSTAAGFENELESLKDAFLKARLDVT
PPKVKARSSAVKISPIKQSQLRNFLSKGQMPPVRSTAPANLSRSAFLSPKYYEDLDDASS
TSSLSQSLEPHPSHLDQEEEELQPLQPPAVTALSTPRHPTVVRTPSIQPGFGGIQSTPLP
KIHSAPSLGFGLSPIPSPVPTNKINLSGADSTALATKTVKHGAPPTERTVPMSAQQAAAN
AAMRRQMANQKPAPVSSSLTESTLKTVPQVVNVQELKEKGLPVQVSSIISSSVPDLTNQA
FANQVKRTTTPGIQKISNESTYGLQPGFVFGQSSKTDVSDVPTSSVEPNISKPFSFTPGS
AGFPFPSVSQGAGMTQAVKDVSKFSFGGNGKMVFGQTAEEPFSLTPKSVASGIGTGTPTL
PLSTSGEAAKHSSLSTAFRTEPQPPKTSGGETLGCFSGLRVGPGEEIKDTVTKPAAAFTF
GEPGLGSGKGVQSFSFASGFQKPAEDSGTTDLSKGASSSSLFKPPETNSKPTFSLPPSSA
TPSTLPTSFSSLLAGSSEEPKAPPQLSEPTPPPEKEPSTTEPAGENASQSVAPEPAVDSS
STATSTPALPALTTATIQDLPSANVASAEVTPPALSIVPFSTEATPDLSFTSSVSTSAVP
TMAPVSQGAPPAFQVPISEKPGSIFTQPTPAPAATPVPAPAPVPAPATTDSSSIGATPVI
NTAAPAATTTTPTTVTPAPTTTANTVFGQQVVPPASSAPSATGFGSTGFSASTGAGFNKS
VFGQSGFGQPASSAGSSSGFSFTQSAFGPSSSSAATGGTSLFGASTAGGASSFSFGSGST
NTASSTGSGMFGQSTTPAFGQSSGFGQPSGFGSNTTTSSSSGFSFGQPSGFGSSAANPVF
GQQSATGSVFGQSSSGNSLFGSTSANVAGSSSGGFFSGLGGKPSEDAANKNPFGAAGSTG
GFGQPAQSGSNNLFGNSGAKAFGFGQTSSAFGDQKPSGTFSTGGGSVASQGFGSFSSPTK
PGGFGSPPVFGSPPSFGGSPAFGNTASFGTSPSFSNAMNPSTGKVFGEGTAAANMGGFGF
SSAPSAPSFGALASQTPPSFGTLAQQGSTFGSQPSSFSGFGQQPQTGGFPVNTFGSASQS
SSQTFSSWRS
NT seq 5973 nt   +upstreamnt  +downstreamnt
atgggagacgacgcagacagccctcctgagagggaaatgaaggattttcagtttcgacag
atgaagaaagtacaagtttttgaggctgctgaagatatgccaaaagacagatccagtcta
cttactgtttcaaacaaatatggcttgacatttgttggccttggccgaacattcaaagtg
tatcttactttaaatattcttgctgctgataaagctgatgggagctcctacgaagtagtc
aaaggtataccagctctggtggaagtgactggggacatgtctttgcaccacttggctctg
agttgtgatgaactcactttgtcagtttgtgggacatccgaggaaaccggtttgtccatc
gcattttatgatgtccgaaccttcataaacaaggccagaccacagaagtcaccatttgcg
tcattgcagccagctgtgacctctgatgctctggttcaggacctgaagtggaaccctgct
cagccttccatgttggctgcctgcttgtcagatggcagcatgatgattcttgaagttata
gacagtgtcaagattcaggctcagctacctgctaacagtggtgtcacctgccttagctgg
agtcctaaaggaaagcaggttgctgtgggaaaaatgaatgccaccgtcagccagtataca
ccagctctggaagagaagagaattatcccatgtccacctttctacaattctgatgaccca
gtcaaagctctggatgtgctgtggcttagaacacctgtgtttgcagtggcatatgcttat
gcagacgggtgtcttgagacccctccagagctggtgctgatctccctccctaaaaaggat
gagaaagtggagccaaagtatttgaacttcggtgagagtgtttttggcagctgtacagag
cgacagcatcactacttcctcagtcacatagaagactgggatcttatgttagctgcgtca
gcggcgtcgattgaggtcagcgtgattgcaagacaagatgacaggatgtgggaggtttgg
ctcctagaagatgctagtagagctgaacttccagtgacggagacgaatgacgacaccctg
cctcttggcttagctatagactacacaagccagcaggagatccaaatcactgacgagaag
actttgcctccagctcccacaatgctaatgctgtccacagagggagtactctgcccattc
gctcttctcaacctgaatcctggggttaagcagctagtctcaccatttactgccctcacc
ttggaaggagagaggcagccaaagccagtttccttggcagcccaaccagccaaaaccgct
gcctctgctggatctgctccagcagcgttcccaaacattgctcttgcatccgtctcttct
gcttcgtctgctcctgcttcgtctgctcctgctgcatcttccttggctgtcccgttcaat
tttgttcctacagctccagtgtcatcctcttcatcagaatttactttttcagttccaacc
actcatgccaccaccaccctccctcctgctttctcccttgggggatctggaccttttagc
tcagtatcctcgagcttctcttttgcttccaaacctccttctgaaactccctcttctgct
tcagcattttcgttcagcaccccttccatgaaacctgcagctccagctccagctccagtg
tcgacccctcagagccttcctcctgcctcccttccttctgtcaaattaaatctaaatgac
agatttacatcaggggagaccccagcaccagctttctcctttaactccacacttcccaag
gctgctgcttcctcttccagtacagctagcaccctttcactcccagccacgaagcctcca
gttgtattgaccccagtgcgtccagttcagacaggcacacctccctcagctgtccagaaa
ccggctcctactacacaagggcgtacccaacctccacaggcaacagttagtatgaagact
ctggagaagcagctgcagcagaagaaagaatctgatcccattatgactggtattttggag
gagattgcacacttccagaaggagttagatgacctgaaatcgcgcagcacaaaagctgac
tttaaggttggtactaacgacgggatgaaggatctgagaaaagaatctgaagaccttcac
atcttcaccctggaaataaaggaaaccactgagtctctccatggggacattgggacgctg
aagaccactttaattgaaggctttgctggggcagaggaagccaaaacgcagagcgagttg
agcaaagacaaaaattacagacagctgctgtacaaaaagtctctagatccacgcagcgaa
gaacagctcaaggaaattcgcagactttaccagtatgtcacatctgctgtggaagacgtt
aatgacgtcttagacgtggaatgggaaaaacacctggagaagaagaagaagcagaaacac
atggttgttcctggacgggagggtcttttcactacactgtccaacaacatctatatcatc
aaccagcaaaagaaccgactggaccagctggttcaggagctcacatcactgcgcctttac
agtaaaaatgctgctccttccattagccagaacattgcaactggatctacagctgctggt
tttgaaaatgagcttgagagtttaaaggatgcattcctgaaagccaggctggatgttact
ccacctaaagtcaaagccagatcttcagcagtcaagatatcaccaattaaacagtcccaa
cttcgcaatttcctctcaaagggacagatgcctcctgtacgctcaactgcaccagccaac
ttgtctcggtcagcgttcctttccccaaaatactatgaggacctggatgatgcaagctca
acgtcctctctgtcccagtccttggagcctcacccgtctcacttggaccaggaagaggaa
gaactacaaccactacagcccccagctgtgacagcgttatccaccccccgccaccccact
gttgtaaggaccccgtctatccaaccaggctttggaggcattcagtccaccccgctacca
aagattcactcagcaccatctttgggttttggactgagccctattcccagtcctgttcca
actaataaaatcaatctcagtggggctgacagcactgctcttgccacaaagacggtaaaa
catggcgctcctccaacagagagaactgtccccatgtctgcccagcaggctgcagccaat
gcagccatgcgcagacaaatggccaatcagaaaccagctcctgttagcagttccttgaca
gagtccaccttaaagactgttcctcaggtggtcaatgttcaggagctcaaagaaaaaggg
ctgcctgttcaggtttcttccatcatcagctcttcggtgccggatctcacaaatcaggct
tttgccaaccaagtcaagcgaactaccaccccaggcattcagaagatttcaaatgaaagt
acatacggtctacagccgggctttgtttttggtcagtcatccaaaacagatgtttctgat
gttcctactagttctgtggagccaaacatcagcaaaccattttccttcacaccagggtca
gcagggttcccttttccttctgtttcacaaggagctggaatgacacaggcagttaaagat
gtcagtaaattctcctttggtggaaatggcaagatggtatttggtcagactgcagaagag
ccgttctctctaaccccaaagtctgtggcctctggtattggcactggaactcccacgctg
cccttaagcacatcaggtgaagcagccaaacacagctccctgtccacagccttcaggacg
gagccacaaccaccgaagacctctggaggagaaactctcggctgtttttctggactacgc
gttggcccaggagaagaaatcaaggatactgtaacaaagccagctgctgcatttaccttt
ggggaacctggacttggcagtggcaagggagtacaatcattcagctttgcgtcaggtttc
caaaagccagcggaagattctggaactacagatttgtctaaaggcgcttcatcaagcagt
ttgttcaagcctcctgaaacaaactccaagccaactttctctcttcccccgtctagcgcc
acaccttcaaccttgcctacgtcttttagtagccttcttgcaggttcttcagaggagcca
aaagctcccccacagctctcagaacctacaccaccccctgaaaaagagccaagcaccact
gaaccagctggggaaaacgccagtcagtctgtggccccagaacctgcagtggattcctca
tctactgcaacatccacacctgcacttcctgcgctgacaactgccactatccaagacctt
ccttctgccaatgttgcatcagctgaagtaactcctccagcactatccattgtgcctttc
tcgacagaagccaccccagacctctcgttcacttcttctgtttccacttctgctgttccc
accatggcgcctgtctctcagggagccccgccagcattccaggttcccatttccgaaaaa
ccaggttccatttttacacagcctactcctgcgccagctgctactcctgtccctgctcct
gctcctgttccagctcctgcgacgacagacagcagctctattggggccacaccagttatc
aacacagctgctcctgcagccacaactaccacccctacaaccgttacccctgcaccaacc
accactgccaacactgtttttgggcaacaagttgtacctccggcttcctctgccccctca
gcaacaggatttggctcgactgggtttagtgcttcaactggggcaggttttaacaaatcc
gtgtttgggcagagtggcttcggccaacctgctagcagcgccggatcatctagcggtttt
tcttttacccagtcggcatttggaccaagctctagcagtgcagcaactgggggaacgagt
ctttttggggcttcaactgctggcggtgcaagttcgttctccttcggcagtggaagcacc
aacacggccagcagcaccgggtcagggatgttcggacaaagcacaactcctgcgtttggt
cagagctctgggtttgggcagccatcaggctttggcagtaacaccaccacgtcctcatct
tcaggattcagttttggtcaaccctcaggatttggttcctctgctgccaaccccgtattt
ggccaacagtctgcaactggaagtgtatttggacaatcgtcatcagggaacagtttgttt
ggttcaacttcagccaatgtagcaggttcatcttctggaggattcttcagcggcctcggg
ggcaaaccgagtgaggatgccgccaacaagaacccattcggtgccgctggttcaactgga
gggtttgggcagcccgctcagtctggttccaacaatctctttgggaatagtggtgcaaag
gcctttgggttcggccagacctcctctgcctttggagaccagaaacccagtgggactttc
agcactggtggagggagtgtcgcttcacaggggtttggctctttttcatcaccaacaaaa
cctgggggctttggcagtcctccagtgtttgggagtcccccgtcttttggtggttcccca
gcttttggtaatacagcatcatttggcacaagcccctccttcagcaatgcaatgaatccc
tcaactggtaaagtgtttggagagggaacggctgctgcaaacatgggaggatttgggttc
tcttcagctcccagtgccccttcgtttggtgctctggccagtcagactcctccttcgttc
gggaccttggcccagcagggctccacatttggaagtcagcccagcagcttctcaggcttt
ggacagcagccacagactggaggattcccagtaaacacgttcgggtctgcgagccagtca
agttcccaaactttttctagctggcgaagctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (88)   
   KEGG ORTHOLOGY (1)   
   RefGene (83)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (4)   
   Pfam (4)   
All databases (107)   

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