KEGG   Xiphophorus maculatus (southern platyfish): 102219898
Entry
102219898         CDS       T02923                                 
Symbol
ptprf
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
  KO
K05695  receptor-type tyrosine-protein phosphatase F [EC:3.1.3.48]
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma04514  Cell adhesion molecules
xma04520  Adherens junction
xma04910  Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:xma00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    102219898 (ptprf)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    102219898 (ptprf)
 09150 Organismal Systems
  09152 Endocrine system
   04910 Insulin signaling pathway
    102219898 (ptprf)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xma01009]
    102219898 (ptprf)
Enzymes [BR:xma01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.48  protein-tyrosine-phosphatase
     102219898 (ptprf)
Protein phosphatases and associated proteins [BR:xma01009]
 Protein tyrosine phosphatases (PTPs)
  Class I PTPs (Classical)
   Receptor PTPs
    102219898 (ptprf)
SSDB
Motif
Pfam: Y_phosphatase fn3 I-set Ig_3 Pur_ac_phosph_N Ig_2 Interfer-bind fn3_2 ig CRLF2-like_D2 Tissue_fac V-set DSPc C2-set_2 Y_phosphatase3 PTPlike_phytase SusE DUF3465
Other DBs
NCBI-GeneID: 102219898
NCBI-ProteinID: XP_023191414
Ensembl: ENSXMAG00000000386
Position
6:complement(21175007..21415381)
AA seq 1923 aa
MVPNVHLAGPLRPRGALLLLLLLGSWVISSLADSKPSFIKTPEDQTGISGGVASFVCRST
GEPRPRITWMKKGKKVSSQRFEVIEFDDGASSVLRIQPLRTHRDEAIYECTATNSVGEIN
ANAKLTVLEENQIPPGFPTIDMGPQLKVVEKTRTATMLCAAGGNPDPEISWYKDMLPVDI
NSSNGRIKQLRSGGTPIRGALQIENSDESDQGKYECVAMNDAGTRYSAPANLYVRVRRVP
PRFSIPPNNQEVMPGGSVNLTCVAVGSPMPFVKWTMGQVELTKEEEMPLGRNVLEVTSIR
ESANYTCVAISSLGMIEATAQVTVKALPKPPTSLTVTETTATSVTLTWDSGNPEPVSYYM
IQYRAKSSDNGFQEVEGVATTRYSIGGLSPYSEYEFRVMAINNIGRGPPSDPVETRTGEQ
APSSPPLHVQARMLSASTMLVQWEPPEEPNGQIRGYRVYYSSDMTAPLSAWQKHNTDDSS
LTTISGLTPDITYSLRVLGFTSVGDGPPSDILQVKTQQGVPAQPSSFEAEAELDTRISLT
WLWPVQDQITKYELQYWEAGSDSKKHVTFSPAGSHSVDGLKPDTMYYFSLAARSEMGLGV
YTQPIQARTAQSTPSAPPQEVHVVSLTSTSLKVSWVAPPADSRHGAIVRYTVSYQAPAGE
NTERRDVSDIGADATSYVLVDLEKWTEYEVWVRAHTDVGPGPESAPVKMRTKEDVPGAPP
KKLEVEAINSTAIRVTWKPPIQVKQHGQIRGYQVIFSRLENGEPRGQPNIMDVALPEAQW
NIEESTEHEAVIGGLLAETTYSVTVAAYTTKGDGARSKAKVVTTTGAVPGKPTMMISTTM
GNTALIQWQPPKEMVGELMGYQLQYKRTDEETFTSLELSKTKDHHTVTELHKGATYIFRL
SARNRAGAGEAYVKEISTPEDLPTGFPLNLKVTGLTQSSTQLTWEPPNLKERNGKITYYR
VVYKDINNHQDNSSNTTETDLTIEGLNPDTTYDIRVQAFTSKGGGPLSPSIQSRTMSNDF
PTLNFGVKAVTKTSVLLTWDLPENYKSQAPFKILYNQQSVEVEGNQKRKLITHLQPDTDY
SFVLTSRGIIAGGLQQQVSIRTAPDLIKAKPVSQTPQDGKMTINLPKVQTTTRVRWFYIV
VVPQTQSMQRWKNPDEVDLEELLRSREGPVLRRRRHVESPRAYVAAKLTHLPPTFMLGDG
QDYMGFKNKPLTNMQEFQWFVVAVLRNEGTDGAANYMTFSSSPYSDPVQIPKQLSQIGDQ
PEMLWVMGPVLAVVVIIIIVIAILLFKNKQERKRASPLPKDEHSGGVKDSLLGNSSDPVE
MRRLNYQTPGPSTHRCPNTPRMREHPPIPVIDLADHIERLKANDGLRFSQEYESIDPGQQ
FTWENSNMEVNKPKNRYANVIAYDHSRVVLTSVDAVPGSDYINANYIDGYRKQNAYIATQ
GPLPETLSDFWRMVWEQRSNTIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTMLDTVE
LATYSVRTFALYKNGSSEKREVRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPM
VVHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRAQRNYMVQTEDQYIFIHESL
LEAATCGNTEVPARNLYAHIQKLTQPPPGETVTAMELEFKRLANSKAHTSRFISANLPCN
KFKNRLVNIMPFESTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLSETTEDFW
RMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKV
TDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVG
RTGVFITLSIVLERMRYEGVVDLFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDH
YAT
NT seq 5772 nt   +upstreamnt  +downstreamnt
atggtgcctaacgttcacctggcagggcccctccggcccagaggggcgttgctgttgctg
cttctactcggctcctgggtgatctcctctctggcagacagcaagccgagttttatcaaa
acccccgaggaccagactggcatctcgggcggggttgcatcgtttgtgtgccggtccaca
ggagagccgaggccgaggatcacctggatgaagaagggcaagaaagtcagctcccagcgc
ttcgaggtgattgaattcgatgacggcgcgagctccgtgctgcggatccagcctctgcgc
acccacagagacgaagccatttacgagtgtaccgccactaacagcgttggcgagatcaac
gccaatgccaagctcacagtgctggaagagaaccagatcccgcccggcttccccaccatt
gacatggggcctcaactgaaagtggtggaaaagacccgaaccgccacgatgctgtgcgcc
gcaggtgggaacccggacccggagatctcatggtacaaggacatgctccctgtagacatc
aacagcagcaatgggcgcatcaaacagctccgctcaggtggtacaccaattagaggagcg
ctacaaattgagaacagtgacgagtcggaccaggggaaatacgaatgtgtagccatgaac
gacgccggcactcgctactctgctcctgccaatctctacgtcagagtgcgaagagtccca
cctagattctctattccacccaacaaccaagaggtgatgccgggcggcagcgtcaacctg
acgtgcgttgcggtgggctcaccgatgcccttcgtcaaatggaccatgggtcaggtggag
ctgaccaaggaggaggagatgccactgggccgcaacgtgctggaggtcaccagcatccga
gagtcggccaactacacctgtgtggccatctcttctctggggatgatcgaagccacggcg
caggttaccgtcaaagccttaccgaaacccccgacctccctgactgtgacggagaccacc
gccaccagcgtgacgctaacgtgggactccggaaacccagaacccgtttcctactacatg
atccaataccgagccaagtcgtcggacaacggcttccaggaggtggagggtgtggcaacc
acgcgctacagcatcggtggactcagcccgtactctgagtacgagttccgcgtcatggcc
atcaacaacatcggccgcgggccgcccagcgaccccgtggagacgcgcaccggcgagcag
gcgccctcgtcgccgcccctccacgttcaggctcgcatgctgagcgccagcaccatgctg
gtccagtgggagccgccagaggagcccaacggacagataagaggctaccgggtttactac
agctccgacatgacggccccgctcagcgcctggcagaagcacaacacggacgacagcagc
ctgacaaccatctctggcctgacgcctgacatcacctacagcctcagggtgctgggcttc
acctccgtaggtgacggaccaccctctgacatcctgcaagtcaaaacacagcagggagtt
cccgcgcagccgtccagtttcgaggccgaagccgagcttgacacccggatctcgctgacg
tggctgtggcctgtgcaggaccaaatcaccaagtacgagctgcagtactgggaggccggc
tcagacagcaagaaacacgtgacgttcagcccggcgggctcccactctgtggatggttta
aagcctgacaccatgtactatttctccttggcagcccgctctgaaatgggtttgggtgtc
tacacccagcccatccaagcccgcactgctcagtccactccctccgctccacctcaggaa
gttcacgtggtcagcctgacctccacaagcctcaaggtgagttgggtggcgccgcctgcc
gacagccgccacggtgccatcgtgcgctacacagtcagctaccaggctccggcgggagag
aacacggagcggcgcgatgtgtccgacatcggtgcagacgccaccagctatgtgctggta
gacctggagaagtggactgagtatgaggtgtgggtgagggcgcacactgatgtgggccca
ggccccgaaagtgccccggtcaagatgagaaccaaggaggatgtgcccggagcccctccc
aagaagctggaggttgaggccataaactccaccgccatccgcgttacttggaagcctcct
atacaggtgaagcagcatggacaaatcaggggctaccaagtcatcttttcccgactagaa
aacggcgaaccacgaggccagccgaacatcatggatgttgctttgccagaggcgcagtgg
aatattgaagagtccaccgagcatgaagctgttattggtggactgctggctgaaaccacc
tactccgtcactgtggctgcttacaccaccaagggcgacggagctcggagcaaagctaag
gtcgtcaccacgactggagcagtgccaggcaaacccactatgatgatcagcaccaccatg
ggaaacacggcactcatccagtggcagccgcctaaggaaatggtgggtgagctgatgggc
taccagctgcagtacaagcgcaccgacgaagagaccttcacctcactggagctgagcaaa
actaaagaccaccacaccgtcaccgagctgcacaaaggagcaacctacatcttccggctc
agcgcccggaaccgcgccggcgctggtgaggcttatgtgaaggagatcagcacgcctgaa
gacctgcccacaggcttcccgctcaacctcaaggtgacgggtctcacccagtcgagcacg
cagctcacctgggagcctccgaacctgaaggaacggaacggcaagataacttactacagg
gtggtgtacaaagacataaacaatcaccaagacaacagcagcaacaccacggaaacagac
ttgaccatcgagggactgaacccagacaccacctatgatatccgcgttcaggctttcacc
agcaaggggggcggccctctgagccccagcatccagagcaggaccatgtcgaacgatttc
ccaacccttaactttggtgtcaaggcagtcacaaaaacctctgtgctactcacctgggac
ctgccagaaaactacaaatcccaggctccattcaagatcttgtacaaccaacagagtgtg
gaggtggagggaaaccaaaagaggaagctgatcacacatcttcagccagacaccgactac
tcgtttgtgctcacaagcaggggcatcattgccggcggtctccagcagcaggtgtccatc
cgcacggcccctgacctgattaaagccaaacccgtctcacaaacgcctcaggatggcaaa
atgaccatcaacttgccaaaagtccagacgaccacccgcgtcagatggttttacatcgtg
gtggtgccacaaacccaatcaatgcagcggtggaagaacccagacgaggtggacctggaa
gagctgctcaggtccagagaaggtccggtgctgaggcgcagacgccacgtggagtccccc
agggcatatgttgcagccaaactgactcatctgccgccaacctttatgctgggtgatggc
caggactacatgggtttcaaaaacaagcccctaactaacatgcaggagttccaatggttt
gttgttgcggtactacgaaacgaggggacggatggcgcagctaattatatgaccttttcg
tccagcccctactctgacccagtccagatcccaaagcagttgtcccaaattggggatcag
cctgagatgttgtgggtcatgggccccgtgctggcggtggtcgtcatcatcatcatcgtc
atcgccatccttctgtttaaaaacaagcaggaaagaaagcgggcgtcacctttaccgaaa
gatgagcactcaggcggcgtgaaggactcgctgctgggcaactcctccgaccccgtagag
atgagacgactcaactaccaaaccccaggtcccagcactcatcgctgccccaacactcca
agaatgagggaacacccaccaattcctgtcattgacctggctgaccacatagagagactt
aaggccaacgacggcctccgcttctcccaggagtatgagtccatcgatccgggccagcag
tttacctgggagaactccaacatggaagtgaacaagccaaagaatcgctatgcaaacgtc
atcgcttatgaccactccagagtggtcctcacctctgtggatgctgttccaggcagcgac
tacatcaacgccaactacattgacggctacaggaagcagaacgcctacatcgccactcag
gggcctctgccggagacactgagcgacttctggagaatggtgtgggagcagaggtccaac
accatcgtcatgatgaccagactggaggagaagtcgagggtgaagtgtgaccagtactgg
ccgtcacgaggaacagagacgtacgggatgatccaggtcacgatgctggacactgtggag
ctggcaacttacagcgtccgaacctttgccctctacaagaacggctccagcgagaagaga
gaggtgaggcagttccagttcatggcctggcctgaccacggcgtgcccgagtatcccaca
cccatcctggccttcctacggcgagtaaaggcctgcaatcctccagacgccgggcccatg
gtggtccactgcagtgcgggcgttggcaggaccggctgcttcatcgtgattgacgccatg
ttggagcgcatgaagcatgagaagaccgtggacatctacggccatgtgacgtgcatgcgt
gcccagaggaactacatggtccagaccgaggaccagtacatcttcatccacgaatccctc
ctggaggccgccacctgcggcaacacggaggtgccggcgcgcaacctgtacgcccacatc
cagaagctcacccagccgccgcccggggagacggtcaccgccatggagctggagttcaag
agactggccaactccaaagcccacacatcacgcttcatcagcgccaacttgccctgcaac
aagttcaagaaccggctggtcaacatcatgccttttgagtccacccgtgtctgcctgcag
cccatccgtggtgttgagggctccgactacatcaacgccagcttcattgatggctacaga
cagcagaaagcctacatcgccacacagggacccctgagtgagaccaccgaggatttctgg
aggatgctgtgggagcacaactccaccatcgtggtcatgctcaccaagctacgagaaatg
ggccgggagaagtgtcatcagtactggccagcagagcgttccgccaggtaccagtacttt
gtggtggatccaatggctgagtacaatatgcctcagtacatcctcagagagttcaaagtc
acagatgccagggatggacaatccagaacaatccgccagttccagttcaccgactggcct
gagcagggagtgccaaaaactggagagggcttcatcgatttcattggacaagtgcacaaa
actaaggagcagtttggacaagatggaccaatcactgtacactgcagtgctggggtaggc
aggaccggagtcttcatcaccctcagcatcgtgctggagcggatgaggtatgagggtgtg
gtagatctcttccagacggtgaagacgctccgcacccagcggcccgccatggtgcagact
gaggaccagtaccagctgtgctacagggcagcactggaatacctggggagctttgaccac
tatgcaacgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (19)   
   RefSeq(pep) (19)   
DNA sequence (19)   
   RefSeq(nuc) (19)   
Protein domain (18)   
   Pfam (18)   
All databases (82)   

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