KEGG   Xiphophorus maculatus (southern platyfish): 102221497
Entry
102221497         CDS       T02923                                 
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM39-like isoform X1
Organism
xma  Xiphophorus maculatus (southern platyfish)
SSDB
Motif
Pfam: SPRY PRY zf-RING_UBOX zf-B_box zf-C3HC4_2 zf-C3HC4_4 zf-C3HC4 zf-C3HC4_3 zf-RING_2 zf-RING_5 Baculo_IE-1 Prok-RING_4 zf-RING_6 DUF4988 UBZ_FAAP20
Other DBs
NCBI-GeneID: 102221497
NCBI-ProteinID: XP_023201499
Position
14:complement(5546250..5555716)
AA seq 659 aa
MTLPLRRVGMAATGNLSEEQVHCSICLDVFTNPVSIPCGHNFCQACILGYWKTSPLYQCP
MCKKSFHKRPDISVNTVLREIAEQFKQIRVKSTEVKGSGEESTGKTKKWTMERKMKEDEE
RLLEKGQMQNLMEELKQKQEEKKKKQEVKESQGEELPPLIPPVLPSKTSPPPSPQDSAQA
LPRETSPPPSPEPTSPALPQTSPISLTPPLLWEEVLCDVCLGEGRPKAVKSCLVCLTSYC
DEHLKSHSTRFTKHKLMEPVANMEDRMCPKHERLLELFCKKDQTCVCVLCTETDHRAHYT
VPVEREWTEKKALLKKTEIDVQQMIQDRVKKVEEIKHSVELNKVSAQREIEESMQVFSEL
VRSIQKAQAELVLVIEEKQRQTEGRAEGLITELEQEISELKTRHTALENVNRTDHIHFLK
SFPALSATPSVKDWFETSVPTDTCVGMIRRSVSKLETTLSEMIDKLSASEIKKIQKYSED
VTLDPDTANPWLQLSQDRHQVRHLGAWQELPDHPERFDTVVIALGKDGFTSGRHYWEVQV
GDKDDWYLGVAKSSVKRKGRISVSTAQGYWALAMKKGQGYRVSTSPPLLLSLDQKPKRVG
VYVDYEEGQISFYDVRARIHIYTFEDAFTERILPFFYLYCCDKASDTMAICPVQEKSLI
NT seq 1980 nt   +upstreamnt  +downstreamnt
atgaccctgcctctccgccgtgtaggaatggctgccactgggaacctgtctgaagagcag
gttcactgctccatctgtctggacgtcttcaccaaccctgtgtccatcccctgcgggcac
aacttctgccaggcctgtatcctgggatactggaaaaccagccctctgtatcagtgtccc
atgtgcaagaagtccttccacaaaaggcccgacatcagcgtgaacacggtgctgagggag
attgcagagcagttcaagcagataagagtcaagagcactgaagtgaagggaagtggggaa
gaaagcacaggtaagaccaagaagtggacaatggagagaaagatgaaagaggacgaggag
aggcttctggagaaaggtcagatgcagaaccttatggaggagctgaaacaaaagcaagaa
gagaagaaaaagaagcaggaagtgaaggagagtcaaggggaggagctaccgccattaatc
cctccagttttgccatctaaaacctctcctccaccatcacctcaagactcagctcaagct
ctgccacgagaaacatcacctccaccttcacctgaaccaacttcccctgcacttcctcaa
acttccccaatatccctgacccctcctctactgtgggaggaagtcctctgcgatgtttgc
ttgggcgagggccgccccaaagccgtcaaatcctgcctcgtgtgcctgacctcttactgc
gacgagcacctcaagtctcactccaccaggttcaccaagcacaagctgatggaaccggtg
gccaacatggaggacaggatgtgtcccaagcacgagcggctgctggagctcttctgcaag
aaagaccagacctgtgtgtgtgtcctctgcacagagacagaccacagggcacattacacc
gtccctgtggagagagaatggactgagaagaaggcactgctgaaaaagacagagatagac
gtccagcagatgatccaagacagagtgaagaaggtggaggagatcaagcactctgtggag
ctcaacaaggtcagcgctcagagagaaattgaggagagcatgcaggtcttctcggagctg
gtgcgctccatccagaaggctcaggccgagctggttctggtcatcgaggagaagcagagg
cagacggaggggcgggccgagggtctcatcaccgagctggagcaggaaatctcggagctc
aagacgcggcacacggctttggaaaatgtgaacagaactgaccacattcacttcctgaag
agttttccggccttaagcgccaccccatctgttaaagactggtttgaaaccagtgttccc
acagacacatgcgttgggatgatcaggagatctgtgtctaaactggagacgacattaagt
gaaatgattgacaagctgtccgcaagtgagataaagaaaattcagaaatattcagaggac
gtcacgctggacccagacactgccaatccatggctccagctctctcaggacaggcaccag
gtgaggcatctgggggcctggcaggaactcccggaccaccctgagcgctttgacaccgtg
gtcatagcactaggaaaagatggcttcacttcaggcagacactactgggaggtccaggtg
ggagacaaggatgactggtacctaggcgtggccaagtcttcagtcaaaagaaaaggtagg
atctctgtgagcacagcccagggttattgggctctggccatgaagaaaggccagggctat
cgggtgtcaacgtcgccgccactgctgctttcactcgaccagaagccaaagagagtaggt
gtgtacgtggactatgaggaaggacaaatctctttttacgacgtgagagctcggatccat
atttacacgttcgaggatgccttcacggagcggatcctgccgtttttttacctgtactgc
tgcgacaaagcctctgacacaatggccatctgtccagtgcaggagaaaagcctcatctag

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (15)   
   Pfam (15)   
All databases (39)   

Download RDF
DBGET integrated database retrieval system