KEGG   Xiphophorus maculatus (southern platyfish): 102222455
Entry
102222455         CDS       T02923                                 
Symbol
bbs4
Name
(RefSeq) Bardet-Biedl syndrome 4 protein isoform X1
  KO
K16531  Bardet-Biedl syndrome 4 protein
Organism
xma  Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:xma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xma03036]
    102222455 (bbs4)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:xma03037]
    102222455 (bbs4)
Chromosome and associated proteins [BR:xma03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Centriolar satellite
     102222455 (bbs4)
Cilium and associated proteins [BR:xma03037]
 Primary cilia and associated proteins
  BBSome
   102222455 (bbs4)
SSDB
Motif
Pfam: TPR_2 TPR_1 TPR_8 TPR_19 TPR_11 ANAPC3 TPR_14 TPR_12 TPR_16 TPR_17 TPR_6 TPR_9 TPR_7 TPR_15 Wzy_C_2 NatA_aux_su PknG_TPR TPR-S TPR_20 ChAPs CotJB
Other DBs
NCBI-GeneID: 102222455
NCBI-ProteinID: XP_023187598
Ensembl: ENSXMAG00000010383
Position
4:26525509..26541209
AA seq 537 aa
MADAENATVLTLPTEAKKRRAPKAPELPIVERRNWLIHQHYLRKDYETCKVIIKEQLQET
NGMCEYAIYVQALILRLEGKIQESLELFQSCAILNPSSSDNLKQVARSLFLLGKHKAAIE
FYHEAAKLNEKDWEISHNLGVCYYFIKDLKNAEEHLNAALQTNKHDKTFVMLGKVHLLAG
DADKAIEVYKRAVEFSPENTELLTTLGLLFLELGKYQKAFEHLGNALTFDPNNYKAILAA
GSMMQTHGDFDVAMNKYRVAACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRAHYLSPF
DWKVLYNLGLVHLTMQQYASAFHFLSAAINLNPRMGELYMLLAVALTNLEDVENATRAYE
QAVNLDDLHRPNPMVNLNFAIFLYNHGDKKRALDQYQEMERKVNQLRDSSSNFEFDLELM
DMAQKMGAVLQVTDTLVWTKPSKDSKAKPHSAAAAKTPGAPLGTNQALGQAMSSAASYNK
NIQLTTGVSKGPSTSLEPEPDVENVPSPPTDPPGCPEPEDPDGSKPRTSKRRSKVEE
NT seq 1614 nt   +upstreamnt  +downstreamnt
atggcggacgcggagaatgctacggtgctgacacttcctactgaagccaagaagcgccgt
gcacctaaagctccagagcttcctattgtggagagaagaaactggctgatccaccagcac
tatctgcgcaaagactatgagacctgtaaggtgatcattaaagagcaactccaggaaacc
aatgggatgtgtgaatatgccatatatgttcaagcactaatcttacgtcttgaggggaag
atccaggagtccctggagctgtttcagagctgcgccatccttaatcccagcagctcagac
aacctcaagcaagtggcccgatcactatttcttcttggaaagcacaaagcagctattgag
ttctatcatgaagcagcaaagcttaatgagaaagactgggagatcagtcataacctgggt
gtgtgttattacttcatcaaagatttaaaaaatgctgaggaacatctaaacgccgctctg
cagacaaataaacatgacaagaccttcgtgatgctcgggaaagttcatctgctggctgga
gacgctgacaaggccatcgaagtgtacaagagagcagtggaattctctccagagaacact
gaactcctgaccactctcggcctcctttttttggagctcgggaagtaccagaaagcgttc
gagcatcttgggaatgccctcacctttgaccccaacaattataaggccatcctggccgca
ggcagcatgatgcaaacccacggtgactttgatgtggccatgaacaagtacagagtggca
gcgtgcgccgtgccggagagcccccctctctggaacaacattggcatgtgcttctttggc
aagaagaagtacgtggcggccattagctgcctgaagcgcgctcactacttgtctcccttt
gactggaaagtgttgtacaacctggggctggtacacctgaccatgcagcagtacgcctca
gctttccatttcctcagcgcagccattaatctgaacccacggatgggggaactctacatg
ttgctggcagtcgctttgactaatttggaagatgtagagaatgccaccagagcatacgaa
caagctgtgaatcttgatgacctccacagacccaaccccatggtcaacctgaactttgca
atattcctctataatcacggagacaaaaagagagctctggatcaatatcaggagatggaa
aggaaagtcaaccaactacgggacagcagtagcaactttgagtttgatctggagctgatg
gacatggctcagaagatgggcgctgtcctgcaggtaacagatactctggtttggactaaa
cccagcaaggactccaaagccaagcctcactctgcagcagcagccaaaaccccgggagct
cctctcggcaccaaccaagctctgggtcaggccatgtcttcagctgccagctacaacaag
aacatccagctaacaacaggcgtttccaaaggcccctccacatctcttgagccagagcct
gatgtagaaaacgtccccagcccaccgactgaccctccaggctgtccagaacctgaagat
ccagacgggtccaaacccagaacctctaagaggagatctaaggtggaagaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (21)   
   Pfam (21)   
All databases (49)   

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