KEGG   Xiphophorus maculatus (southern platyfish): 102225619
Entry
102225619         CDS       T02923                                 
Name
(RefSeq) lissencephaly-1 homolog
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma00565  Ether lipid metabolism
xma01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:xma00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    102225619
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xma03036]
    102225619
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xma04147]
    102225619
Chromosome and associated proteins [BR:xma03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    102225619
Exosome [BR:xma04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102225619
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 Nup160 LisH eIF2A Nucleoporin_N Pox_A_type_inc DUF2570 ARMC9_LisH LisH_2 DUF6813
Other DBs
NCBI-GeneID: 102225619
NCBI-ProteinID: XP_005801101
Ensembl: ENSXMAG00000008604
UniProt: A0A3B5QP08
Position
18:20429748..20467179
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDNNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPVSQKRDPKEWIPRPPERYALSGHRNPVTRVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILDATGSE
TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGILFHPGGKFIVSCADDK
TLRIWDYKNKRCMKTLSAHEHFVTSLDFHKAAPFVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcacaacggcaacgagacgaactaaatcgagcaatagccgattatctacgt
tccaatggatacgaagaggcttactccactttcaagaaggaagcggaattagataataat
gaagaactggataagaagtacgctggccttttggaaaaaaaatggacctcagtcatcaga
ttacaaaagaaggtgatggagcttgaatcgaagctgaacgaagcaaaagaggaaatcacc
ctgggtggaccagtcagtcagaagcgtgaccccaaagagtggatcccgcgtccgcctgaa
agatacgcgctgagcggccaccgcaaccccgtcacccgtgtcatcttccacccagtcttc
agtgtcatggtgtcggcctctgaggacgcaacaataaaggtgtgggactatgagacagga
gactttgaacgcacactgaaaggccacacagattctgttcaggacatctcattcgaccag
actggcaagctgctggcgtcctgctctgcagacatgactatcaaactgtgggacttccaa
ggcttcgagtgcatcaggaccatgcacggacatgaccacaatgtttcatctgtagccatc
atgcccaatggagatcacattgtttctgcctccagggacaaaaccattaaaatgtgggaa
gtggcaactggatactgtgtgaagacctttacgggccacagggagtgggttcgtatggtg
cggcccaaccaggacggcacgctgatcgccagctgctccaacgatcagacggtccgtgtt
tgggtcgtggccaccaaagaatgcaaggcggagctgcgggagcacgaacacgtggtggag
tgcatctcctgggctccagagagcgcacaccccaccatcctagacgccacaggctctgag
accaagaagagtggaaagcctgggccttttctgctgtctggttccagagacaaaactata
aagatgtgggacgtgagcactgggatgtgcctgatgacactggttggacatgataactgg
gtgcgtggcatcctcttccaccctggaggaaagtttatagtgagctgtgcggatgacaag
accttaaggatctgggactacaagaacaagcgctgcatgaaaaccctgagtgcccatgaa
cactttgttacctctctggatttccacaaggctgcgcccttcgtggtcactggcagcgta
gatcaaacagtaaaagtttgggagtgtcgctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (49)   

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