KEGG   Xiphophorus maculatus (southern platyfish): 102227509
Entry
102227509         CDS       T02923                                 
Name
(RefSeq) integrin alpha-6-like isoform X1
  KO
K06485  integrin alpha 6
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma04510  Focal adhesion
xma04512  ECM-receptor interaction
xma04514  Cell adhesion molecules
xma04810  Regulation of actin cytoskeleton
xma04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:xma00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102227509
   04514 Cell adhesion molecules
    102227509
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102227509
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102227509
   04810 Regulation of actin cytoskeleton
    102227509
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xma04147]
    102227509
   04515 Cell adhesion molecules [BR:xma04515]
    102227509
   04090 CD molecules [BR:xma04090]
    102227509
Exosome [BR:xma04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102227509
  Exosomal proteins of breast milk
   102227509
Cell adhesion molecules [BR:xma04515]
 Integrins
  Integrin alpha subunits
   102227509
CD molecules [BR:xma04090]
 Proteins
  102227509
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha Protocadherin
Other DBs
NCBI-GeneID: 102227509
NCBI-ProteinID: XP_023192023
Ensembl: ENSXMAG00000005122
Position
7:16000077..16023514
AA seq 1083 aa
MALLQQRGHFAVQAALFLLCHLLEPSGLRAFNLDTRHVIRKGGEPGSLFGFSLALHQQVN
PNKVLLLIGAPRAKALKNQKSNVTGGLFKCEISESDNCERIEFDNDEDPSQESKQDQWMG
VSVQSQGPGGKVVTCAHRYQKHSRVSQSVLGRCYVFSQNLTINYDDMDGGQWKFCEGRRG
ETDHAWYGVCQQGLGVTFTKDYHYVVFGAPGARNWKGMVRVEQKNITLIERGIYNDGPYE
YENDNDNFKHPNNPVPAHSYLGFSLDTGHHIMKSRDLTVVAGAPRANHKGLVALLKKKFI
EQLVVEQLLHGPGLGSSFGYDVAVVDLNGDGWQDIVVGAPYFYMKDTDIGGAVYVYINTA
GQWDNVTPIRLNGTKDSVFGLAVENIGDVNQDSFNDIAVGAPQDDEGAGRVYIYHGSAQG
IKTTPAQILSGKEHSLRYFGYSLAGNMDLDGNSYPDLAVGSLSDAALIYRARPIVNIRKN
ITVSPEEIDLSVGCDSSFCFTVKACFNYTATSYNKRLTISYFIEADGDRRKQGLNSRVIF
LTKTHPESDVQFNGTLELQNQNAGQCVSINVGLKDNIKDKMRSVVIEVSAEIIKAKLKKM
GNGLPQIMPVLDATQPRQAVTEVNFVKEGCKNKRICYSNLKMENNLHYIPISRNEFTPLS
KSAHNIPEFKLTYEKKDLAVKVTVTNKNGDDAYEAKLVGKFPEILSYSGVRSSNKQILCT
ANHNGSEAECELGNPLKSNSKVMFYIILSTAHNAVKLNTTEFEIDLHLQTTSSQNISSVK
IKSKVITEFPLTLSGEAKPSQVSFGGVVRAETAMKTEEDAGSLINFTFRISNLWTPSISP
PPVTLHIHWPRDNKDGKWLLYLVKVTSHGPEKIACSPQSEIHSLKDIWKRSPSPTKQEIV
KKERKLGGKIAFRSSSTKVLSCEKESKCVVLKCPLQGIDGTAVELRSRLWNSTFIEEYAS
FPTITLVVKASLVLESQAQNIILKSPDFTVKVPVSPDSDVAQFGVPWWIILIAVLAGILI
LALMVFLLWKCGFFRRSKQDDSIPRYHAVRIKKETPGHSDGKMKPGALEKKQWMTTWIND
DYS
NT seq 3252 nt   +upstreamnt  +downstreamnt
atggcgctgctgcagcagagaggacactttgctgtccaggctgcgcttttccttctctgt
catctgctggagccgagcggactgcgcgctttcaacctggacacccgtcatgtcatcagg
aaaggcggggagccggggtctctcttcggcttctccctcgccttgcaccagcaagtcaac
ccgaataaagtcctgttactaattggtgccccgagagccaaggctttaaaaaaccaaaaa
tccaatgtgactgggggcctttttaagtgtgaaatctctgagtctgataattgtgagcgc
attgaatttgataatgatgaggatccaagccaggagagtaagcaggaccagtggatgggt
gtgtctgtgcagagtcagggacccgggggaaaggttgtgacatgtgcgcatcgatatcaa
aagcatagcagagtttcccagtctgtcctcggtcgctgttatgtcttcagtcagaatttg
accatcaactacgatgatatggatggaggtcaatggaaattttgtgaagggagacgagga
gaaaccgatcatgcatggtatggagtctgtcaacaaggtctgggggtcaccttcaccaag
gactaccattatgtggtgtttggagccccaggagcaagaaactggaaagggatggtacga
gtggaacaaaaaaacatcacgttgatagaaaggggtatatataacgatggaccgtatgag
tatgaaaacgacaacgacaactttaaacaccccaacaaccctgtgccagcccacagctac
cttgggttctctctggacaccgggcaccacatcatgaagagccgtgacctgaccgtggtg
gctggcgcaccgagagccaatcacaagggacttgtagccctgctgaagaaaaaatttatc
gagcaactcgtagtggagcaacttctgcatgggccgggactgggatcctcatttggatac
gatgtggctgtggtcgacctgaatggtgatggatggcaagacattgtcgtgggagcccct
tacttctacatgaaggacacagacatcggtggagccgtttatgtttatatcaacacagca
ggacagtgggataatgtaactccgattcgcctaaacgggaccaaagattcagtgttcgga
ctggcagtggaaaacatcggggatgttaatcaggactcatttaatgatattgcagttgga
gctcctcaggacgatgagggggcaggaagagtctacatttatcatggatctgcacaagga
ataaaaacaactcctgcacagatcctttcaggcaaagagcacagccttcgatattttgga
tattctctggcaggaaacatggacctggatggtaactcttatccagacctggctgtagga
tctctgtcagatgcagctttgatttacagggcgagaccaattgttaacatcaggaaaaac
attacggtttctcctgaggaaattgacctcagtgttggctgtgattccagtttttgcttc
actgtgaaagcatgtttcaactacacagcgacatcctacaacaagaggctcacaatcagc
tacttcatagaggcagatggagaccgcaggaaacaaggactgaactccagagtgattttt
ctgactaagactcatcctgaatcagacgtccagtttaatggcaccttggagctccagaat
caaaacgcaggacagtgtgtcagcataaacgtcgggcttaaggacaacattaaggacaag
atgcgcagcgttgtcattgaagtttctgcagaaattatcaaagcaaaactaaaaaaaatg
ggaaatggtctacctcagataatgccagttttagacgccacccagccacggcaagccgtc
acagaggtaaactttgtaaaggagggatgtaaaaataaaaggatttgttatagcaattta
aaaatggagaacaatctgcactacataccaatcagcaggaatgaattcaccccgttaagc
aaaagtgcacataatataccagagtttaagctgacttacgagaagaaggacttggctgtg
aaggtgacggtgaccaataaaaatggtgacgatgcctacgaagcaaagcttgtggggaaa
ttcccagaaatcctgtcgtattctggagttcgatcttcaaacaagcagatcctctgtact
gccaaccataatggatctgaagcagagtgtgagctgggaaacccacttaagagcaactca
aaggtcatgttttacatcattctgagcactgcgcacaatgctgtaaaactcaataccact
gagtttgagattgatcttcacctccaaacgacaagttctcaaaatatttcctctgtgaaa
ataaagagcaaagtgataactgaattcccattgacattgagtggtgaagccaaacccagt
caggtttcctttggcggtgttgtgagagcagaaactgcaatgaaaacagaagaggatgct
ggaagtttgattaattttacatttagaataagtaacttgtggacgccttcgatctctcct
ccccccgtcactctacacattcattggcccagagacaataaagatgggaaatggcttctg
tacttggtgaaggtcacatctcatggacctgagaaaatcgcctgctctcctcaatctgaa
attcactctctcaaagacatttggaagagatctccttccccgacaaaacaggaaattgtc
aaaaaagaaagaaaacttggtggcaaaattgcttttcgttcaagcagtactaaagttttg
tcctgtgagaaggaaagcaaatgtgtggtgctaaagtgccctctgcaggggattgatggt
actgcagttgagctgagatctcgtttgtggaactccaccttcatcgaggaatatgcttcc
tttccaaccataactttagttgtgaaggcttcacttgtacttgagtctcaggctcagaac
attatcctgaaatctcccgactttactgtgaaggtgcccgtatccccagacagcgacgtg
gctcagttcggagttccttggtggatcattctgatagcggttctggcaggaatcttgatt
ttggcattgatggtgtttctgttgtggaagtgcgggttcttcagacgctccaaacaagac
gacagcatacctcgctaccacgcagtgcggataaaaaaggaaactccgggccacagcgat
ggaaaaatgaaacctggtgctttagaaaagaagcagtggatgacgacgtggatcaacgac
gattattcatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (7)   
   Pfam (7)   
All databases (63)   

Download RDF
DBGET integrated database retrieval system