KEGG   Xiphophorus maculatus (southern platyfish): 102229914
Entry
102229914         CDS       T02923                                 
Symbol
pus7l
Name
(RefSeq) pseudouridylate synthase 7 homolog-like protein
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
xma  Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:xma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:xma03016]
    102229914 (pus7l)
Enzymes [BR:xma01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     102229914 (pus7l)
Transfer RNA biogenesis [BR:xma03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    102229914 (pus7l)
 Prokaryotic type
    102229914 (pus7l)
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-GeneID: 102229914
NCBI-ProteinID: XP_023206059
Ensembl: ENSXMAG00000009074
Position
17:complement(11677571..11682713)
AA seq 682 aa
MTESPVKVTMKGDEPVNVPAYFISKHEGFVGSIKTFIEDFVVTEIDINGQKVKTAQAVQT
AGCTSSEENQANTELKENLYCSGSQDADVSSDWGAGSDTPLPALGSFDLDVILGPSVSED
LEQFVMTLREKRPSGPELSLGSFSDKHQRANVHRAVRHRFPFLLTVTIQPEIRVREDPDY
RELARLVREEEAEDFFRFIDAKVRGSSYTFGPDDSKEHRTAVHHFLNRRFGKLVETKSFC
SQGRTSISVRLREHGKPKKRTAEERKEEDIYTAFTLCKENLETLEAISYMAATLGVLPSD
FTYAGIKDKRAVTYQSMVVKKVSPQRLKEKVAEFEKRGMRLSQIRSVNEPLKLGRLRGNH
FDLVVRKLRPHGASDGHLSGADGDTRLAALVKEAVENVKRRGFVNYYGPQRFGSGQSVLS
DRVGLALLKEDMVSAVRLFFSPEDSDDPHSLAKRHFLQTDNPKESLALMPLSKPRERLML
RALNRYGTGPDGCVQAWLSLPHSIRVFYPHAYCSRVWNDAAAHRLSAMGLGVRQGDLVWT
QTGQNRTEDAGEIISPQIHVVTREEEQAGVYTLEQVLLPMPGNSVKYPENAMRAWYQERL
AGDGMAESRFRVSSLKLNLPGCYRPLLAIPHNLSYQLHRAACSHGAKKQESDPGSLTLSL
NFDLDSSCYATICLREIMKCET
NT seq 2049 nt   +upstreamnt  +downstreamnt
atgacggagtcaccagtaaaggtgacaatgaagggcgatgagcctgtaaatgttcctgca
tacttcatctcaaaacatgaaggcttcgttggaagcatcaaaaccttcattgaggacttt
gttgtcaccgagatcgacattaatggacagaaggtcaaaacagcacaagccgtgcagaca
gccggctgcacctcctcagaggaaaaccaggcaaacacagagttaaaggagaatctttac
tgttctggctcgcaagacgctgacgtctcatcagactggggggcgggttcagacacccca
cttcctgctttgggaagctttgatttagatgttattttaggcccatctgtgagtgaagat
ctggagcagtttgtgatgaccctaagagaaaaacggccgtccggtcctgagctctctctg
ggctccttctccgacaaacaccagagagccaacgtccaccgagccgtccggcaccgcttc
cccttcctcttgaccgtcaccatccagcccgagatcagggtgagggaagaccccgactac
agggagctggcccgactggtcagagaagaggaagcggaggacttcttcaggttcatcgat
gccaaggtgcgggggtcgtcttacacttttgggccggacgacagcaaggagcacaggact
gcagtgcaccactttctgaacaggaggttcgggaaactggtggagacgaaaagcttctgc
agccaaggaaggacgtcgatctcggtgagactgagagagcacggcaagccgaagaagagg
acagcggaagaacgcaaggaagaagacatttatactgctttcaccctgtgtaaggagaac
ctggagacactggaagccatcagctacatggcagctactctcggggtcctgccgtcagac
ttcacctacgccggcatcaaggacaaaagagccgtcacctaccagtccatggtggtcaag
aaggtctcgccacaacggttgaaagagaaagtagcagaatttgagaagagagggatgcgt
ctctctcagatccgctcggtcaacgagcccctgaagctgggacggctgcgggggaaccac
tttgacctggtggtccgcaaactcagaccacacggagcctccgacggacacctctctggc
gctgacggggacactcgcctggcggctctcgtgaaggaagccgtggagaacgtgaagagg
agaggttttgtcaactactatgggccacagcggtttggaagcggacaaagcgtcttgtca
gatcgagtaggattggctctgctgaaagaggatatggtcagcgctgtacgtctgttcttc
tctccagaggacagtgatgatcctcacagcctcgcaaagagacacttccttcaaacagat
aaccctaaggaatctttggcactcatgccgctgtccaagcccagggagaggctgatgctc
cgcgccctgaatcgctacggtaccggcccagatggttgtgtccaggcgtggctcagcctg
ccgcacagcataagggttttctatcctcacgcctactgtagcagggtgtggaacgacgcg
gcggcacacaggctctccgcgatgggtctcggtgtcagacaaggagacctggtgtggacg
caaacaggacaaaacagaaccgaggacgccggagagatcatttctccccaaatccacgtg
gtgacgcgtgaagaggagcaagcgggagtttacacattagaacaagtgttattgccaatg
ccagggaactctgtcaaatatccagaaaatgcaatgagagcctggtaccaggagaggctg
gcaggagacgggatggctgaaagccgcttcagagtcagcagcctcaaactgaacctgccg
ggctgctaccgccccctgctggccatcccacacaacctcagctaccagctgcacagagca
gcctgcagccacggcgcaaagaagcaggaatcggacccggggtctctcacactcagcttg
aactttgacctagactcctcctgttacgccaccatctgcctccgagaaatcatgaagtgt
gagacttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system