KEGG   Xiphophorus maculatus (southern platyfish): 102230915
Entry
102230915         CDS       T02923                                 
Name
(RefSeq) transcription factor RelB isoform X1
  KO
K09253  transcription factor RelB
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma04010  MAPK signaling pathway
xma04625  C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:xma00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    102230915
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    102230915
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xma03000]
    102230915
Transcription factors [BR:xma03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) Rel/Ankyrin
    102230915
SSDB
Motif
Pfam: RHD_DNA_bind RHD_dimer
Other DBs
NCBI-GeneID: 102230915
NCBI-ProteinID: XP_014326149
Ensembl: ENSXMAG00000004297
UniProt: M3ZQ09
Position
18:complement(23295420..23310002)
AA seq 577 aa
MRDMDFFTAEEPTPSSGINAFSHICTPNGELDLISEIINGCSEQQNGSLPAPLPLPPPPD
RCWRTTEGEDVLNQDGFTLLQNLQPASKPVLVPRGTAPNPAPLREMASGHPSHKPVGPTG
RGRGPSCSLTPKGGVPSQSLQSNGNMLERILEKPKLVVVEEPKDRGMRFRYECEGRSAGS
ILGASSTDNNKTQPTIEIQGPIDHIKKVTVTVSLVTKDYPHRPHPHCLVGKDCVAGSGIC
VVCFNPHTARRHSFANLGIQCVRRRELDVSLQKRRNQNIDPFKTGNTKGIEDMDMNAVRL
CFECLLEWDDGRKDSLCPVISKPIYDKKATTTSELKICQLNLSKGSCRGKTEVYMLCDKV
QKDDIEILFRHGSWKANGEFAQTDVHRQIAIVFKTPPYQDQDITEEVEVNVLLRRVSDQM
ESEPVSFMYLPHNPDPYEVKRKRATIKRDISVTEPAPSSKQTFNFPMETQNVMSSDDSHL
AFLPSPETGMMDHGVLDEQTMLDFLQFLTEQNLPGDIAADANAFPCLNVNLSANYNHFPP
DFSQFNDIQFNMLVTDSQMAQSEQQDSVMQVKTEEEL
NT seq 1734 nt   +upstreamnt  +downstreamnt
atgagagatatggacttcttcacagccgaggagccaacacccagttcggggatcaacgcg
ttttcgcacatttgtactcccaatggcgaactcgatctaatttcagaaatcatcaatggc
tgcagcgaacagcagaacggctcccttcctgccccactgcctcttcctcctcctccagac
cgctgctggaggacgacggagggtgaagacgtcctaaaccaggacggcttcaccctcctg
cagaacctccaaccggcgtccaaacccgtgctggtacccagaggcactgcacctaacccc
gctccactgcgagagatggcgtctggtcatccttcccacaaacccgtgggccccacaggc
agaggtcgaggcccgtcctgctcgctgacccccaaaggcggcgttccctcccaaagcctg
cagagcaacggcaacatgctggagcggatcctggagaagcccaagctggtggtggtggag
gagcccaaggaccggggaatgaggttccgctacgaatgcgagggtcgctcggccggcagc
atcctgggggcgtccagcaccgataacaacaagacgcagcccaccatagagattcagggt
cctattgaccacataaagaaggtcacagtgaccgtttctttggtcaccaaagactatccc
caccggcctcacccgcactgccttgtgggtaaagactgtgtagctggctcaggaatctgt
gtggtctgctttaaccctcataccgcccgacgtcacagctttgctaatctcggcatccag
tgtgtgagaaggagagagctggacgtgtcgctgcagaaaaggagaaaccaaaatatcgac
ccttttaaaactggtaacactaaagggatcgaggacatggacatgaacgcggtgcgtttg
tgtttcgagtgcctgctcgagtgggacgacggcaggaaggactcgctctgcccggtcatc
tccaagccgatctacgacaagaaggccacgaccacgtcggagctgaagatctgccagctg
aacctgagcaaagggtcctgcagaggcaagacggaggtctacatgctgtgtgacaaagtg
cagaaagacgacatagagatcctcttcaggcatggctcgtggaaggcgaacggcgagttc
gctcagacagacgtccatcggcagatagccatcgtgtttaagacgccgccctaccaggac
caagacatcacggaggaggtcgaggtcaacgtcttgctgcgccgcgtctcggaccagatg
gagagcgaacccgtctccttcatgtacttgccgcacaatcccgatccgtacgaagtgaag
cgaaagagagccacgattaaacgggacattagtgtgacagagccagcaccatcttcaaag
cagacattcaacttccccatggagacacaaaacgtgatgtcatcggatgacagccacctc
gcctttctgccttctcctgaaacgggcatgatggaccacggcgtcctggacgaacagacc
atgctcgacttccttcagtttttgaccgaacagaacttgccaggcgacatcgccgcagac
gccaacgctttcccctgcctgaatgtgaatttaagcgcaaactacaaccactttccgccg
gacttttcccagtttaacgacatccagtttaatatgcttgtcactgacagccagatggcg
cagtcagaacagcaggacagtgtcatgcaggtgaaaacagaggaagagctatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (35)   

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