KEGG   Xiphophorus maculatus (southern platyfish): 102231512
Entry
102231512         CDS       T02923                                 
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X2
  KO
K10652  tripartite motif-containing protein 25 [EC:2.3.2.27]
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:xma00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    102231512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xma04121]
    102231512
Enzymes [BR:xma01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102231512
Ubiquitin system [BR:xma04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    102231512
SSDB
Motif
Pfam: zf-RING_UBOX zf-C3HC4_2 zf-C3HC4_3 zf-C3HC4 zf-RING_2 zf-C3HC4_4 zf-RING_5 zf-B_box Astro_capsid_p CENP-B_dimeris
Other DBs
NCBI-GeneID: 102231512
NCBI-ProteinID: XP_005803137
Ensembl: ENSXMAG00000017926
Position
5:17092954..17101383
AA seq 528 aa
MADLEDSGFALMSLEDELTCSICLSTFDCPVTIPCGHNFCQDCLLSTWTDSYSCPQCRTL
FETRPELKKNTVLCTVVETFRARSSKSEGGQFEEEEDEEEEEEEEEEDEDEEGDEDERDD
VVRCDTCMEAEAAQTCFTCMASFCEEHLRPHRENPTFRLHQLTEPIGDLSEHICTDHHKL
MEHFCTDHGRLICSLCLQQVHKGCGFSSPEEQRSLKASEFRDKLEILNLKIDRTDTIVLQ
MNELQGKLKDAASKRKVALAAVYHQIGEMLAQDERVAQHEVDCELEASQTKLRDLTTKFI
DNSERMKKAREKIDTLLSQAGTPAFLQASFELPRVVKFDPYPPRINLDSKRVMATQNFAA
TLQESLMTLFTQPFEDRVPLLKPGQAEASFSGAAGGENSPAWATESQYSKPPEQRPPPRS
HSPCRPPVQTVYQPVHIPVYIQAKPTWNPQQGQTPGFSRPPFFHGQKPHKKPDGGHQPSH
KQGKKPPSAQGGQKPGWKGPDSAKKDKPKGHPPSGKPAGPNPHPRKNK
NT seq 1587 nt   +upstreamnt  +downstreamnt
atggccgacttggaggactctggctttgctctcatgagcctggaggacgagctgacctgc
agcatctgtctgagcacctttgactgcccggtcaccatcccctgcggacacaacttctgc
caggactgcctgctctccacctggaccgactcctacagctgcccgcagtgtcggactctg
tttgagaccaggccggaactgaagaagaacacggtcctctgcaccgtggtggagaccttc
agggcgaggtccagcaagtccgaaggaggacagttcgaagaggaggaagacgaggaagaa
gaagaagaggaggaggaggaggatgaagacgaggaaggggatgaggatgagagggatgat
gtggtccgctgtgacacctgtatggaggccgaggcagcgcagacctgtttcacctgcatg
gcctccttctgcgaggagcacctgcggccccaccgggagaaccccacctttcgcctccat
cagctgaccgagcccatcggggatttatccgagcacatctgcaccgaccaccacaagctg
atggagcacttctgcaccgatcatggccgcctgatctgcagcctctgcctgcagcaggtc
cacaaaggctgcggcttttcctctccagaggagcaaaggagcctgaaagcgtctgaattc
agggacaagttggaaattctgaacttgaagatcgacaggactgacaccatcgtgcttcag
atgaacgagctgcagggcaagctcaaggacgcagcgagcaagaggaaggtggcgctggct
gctgtgtaccatcagataggggagatgttggctcaggatgagcgcgtggcccagcatgag
gtggactgtgagctggaggctagtcagaccaaacttcgcgacctcacaacaaagttcatc
gacaacagtgagaggatgaagaaagccagagagaagatcgacactctgctgagtcaggcg
ggaacgccggcctttctgcaggcttcatttgagttgccccgggtggttaagtttgacccc
tacccccctcgaattaacctggactccaaaagggtgatggcaacacagaactttgctgcc
accctgcaggagagcctgatgacgctcttcactcagccttttgaggacagagtaccactg
ctaaaaccaggacaagcagaagcttctttctctggagctgctggtggagaaaacagtcca
gcctgggcaaccgagtctcaatactcaaagcctccagagcaaagacctccacccaggtcc
catagtccatgtcgtccacctgtccagaccgtctaccaacccgtccatattcctgtttac
atacaggcaaagccaacatggaatccgcagcagggtcagacacctggcttttccaggcct
ccgttcttccacggacagaaaccacacaagaagcctgacggtggccaccaaccctctcac
aagcaaggcaaaaagccaccaagtgcacaaggaggacagaagcctgggtggaaaggaccc
gattctgctaagaaagacaagccgaaaggacatccgccatcggggaaaccggccgggccc
aacccacatcctagaaaaaataagtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (10)   
   Pfam (10)   
All databases (42)   

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