KEGG   Xiphophorus maculatus (southern platyfish): 111612345
Entry
111612345         CDS       T02923                                 
Symbol
fanca
Name
(RefSeq) Fanconi anemia group A protein isoform X1
  KO
K10888  fanconi anemia group A protein
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:xma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    111612345 (fanca)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xma03400]
    111612345 (fanca)
DNA repair and recombination proteins [BR:xma03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex
     111612345 (fanca)
SSDB
Motif
Pfam: Fanconi_A_N Fanconi_A
Other DBs
NCBI-GeneID: 111612345
NCBI-ProteinID: XP_023209208
Position
2:41734..74548
AA seq 1443 aa
MSLQTSCGSQKRPLCSLLAGRGLKKPKLDDGERLQEAAVQLLDRNQNLCSLFQELQNPDP
CRMICFQNVEQNRNPEQNQAASDADPLNVAGLLVGSELRRQAERRGVSVGAVSVKTMLDR
LEEIVGGQEDKLRQMFTSSQRVQLQVLLEAGKLLLYQGVFCPRLLWAEYRRDQKHPHLEL
LYFLHLYNILTLDYIIESDDAVASWLPGQLKALCCWTPPQEEEETRRVQQEVLSTVVGVL
VASPRSLVLDELLHWFLDIKEECDEGAERWIQTLDASLCGGSVSPEALQRFFAHCLTQIF
TWNPQLTVSDAVTSQNDWTVAKAGRRLTSLCCKLAAIFSVEQLLHHLQQVLETHEVNWKH
VLVFVSTLLVYDQLAQPSLSELLCHLLSSAFRGYDLEKLITAFLLARQGALEGAGVFPSY
TDWFKMSFGGRSGFHAGSKKSLVFLLKFLSDLVPFEPPQYLKVHILHPPFVPPKHRSLLM
EYVTLAKTRLADLQESVEDMGLYEDVSAAGASLQSQAAQDVEKAVCLFESSGRIPATVME
ASIFRRPYFLTRFLPALLKPRAVRTFSVFVRAVRTFGVLSRFFSSFQLPLEADAQMNFIE
ALKQAEKIPAAQYSQYVESCQKRRQQSGSPQRPGVPLAVLQEQLQEFTELLAAGRDPESL
AQLSRISHTLSVVCPGSDDPVGPAAAPLLPELLLKVNLVLVLDHVGSAVLKRLCCDLQVA
DLILQSFCQSLLVASRGNPPNRQSLWGSRFVCVLLDNRQLLSSVIHRLKDLFNRQAASLK
PAHILGLAAFIVHLQAAQPGPAQPGPVSVEEALGSAVLSGSRSSMLFSVRLAVAAVSYGL
CRGQSASPQRLQDFVPRSLYKKLLFLVPRLFPEARIRPEGQGGDGPTGGHLGDGLSLLWS
FTDGTSWTKTVLHLWRHAAFQQLQQLQLYQLCFSEWLHEELRVQRNSDVLSDAERQEYQQ
WACWELYLPRPEEQGGCGGDPRVLCSRLLTAVMEPPPSREMNLENLDFSPGSSGTGTCLP
DLLSRLQELVYEAEVGELSGRRGHLGDFLLRVVSEKCSASSGSISSRLSLQRTMEAWNRV
LLTLPPAMFFKIKAEAGRSIVDCSQLLQHITQLQRKACPPAGVLPCAVTVHLLKGLLFAV
GQCGRPAAEVDRVWSLMSTSCPLLLISAVRWWQQISPVLVSLWIRLQDAEPFPEQLQLLS
ACRLWACSLRAGPVLVQIPPGPVLVQAASLHGSFRGGAEPQQNFREVLDGLREAENQQVL
VSLLFLFVTDFLSELLDPQEKNSGRSKWLCSELLAVLVNSADWLLLFRSNELDPEPDPVT
LTVSDDCSRLMPWAVCSLLQQQSAAFHQRALRCPGFLHSATLWYLAVLRLFLDGEAPASA
RQVEPTRVLDRTKQFVLSLIRQAPAAALSCSQWRQLETRCADLDPELAATLSIHLDHPRV
GFL
NT seq 4332 nt   +upstreamnt  +downstreamnt
atgtccctccaaacgtcctgtgggtcgcagaaaaggccgctctgctccctcctcgctggc
cgcggcttaaagaagccaaagcttgatgatggtgagcggctgcaggaggccgcggtccag
ctgctggaccggaaccagaacctgtgcagcctgttccaggagctgcagaacccggatcca
tgtcgcatgatctgcttccagaacgtggagcagaaccgaaacccggagcagaaccaagca
gcgtctgatgctgaccctttgaacgttgcaggactgctagtggggagcgaactgcggcgt
caggccgagcgacggggcgtctccgtcggagccgtgtcggtgaagacgatgttggacaga
ctggaggagatcgttgggggacaggaggacaaactgaggcagatgttcacgtcttctcag
agagtccagttgcaggttctgttggaggctggcaaactgctgctataccaaggagttttt
tgccccaggctgctgtgggcggagtaccgaagagatcagaagcatcctcacctggagctg
ctgtactttcttcacctttacaacatcctcactctggactacatcatagaaagtgatgac
gccgtcgcatcatggctgcccggtcagttaaaggctctctgctgctggacgcctccgcag
gaggaagaggagaccagacgagttcaacaggaagttttatccaccgtggttggagtcctg
gtggcatcgccgaggagtttggtactggatgagctgcttcactggtttctggacatcaag
gaagagtgcgatgaaggagcagagcgatggattcagactcttgatgcttcactgtgtgga
ggttcagtgtcaccagaagctcttcagcggttctttgctcactgcctgactcagattttc
acctggaatcctcaactgacagtgtcggacgctgtgacttcgcagaacgactggacggtt
gctaaagccggccgccgtctgacctcgctttgctgcaagctggctgcgatcttcagcgtg
gagcagctgctgcatcacctgcagcaggttctggaaacgcacgaggtcaactggaaacac
gtcttggtctttgtctccaccctgctggtttacgaccagttggcccagcccagcctcagc
gagttgttgtgccacctgctgagctcggcgttcagaggctacgatctggagaagctgatc
accgccttcctgctggcccggcagggggcgctagagggcgccggcgtgtttccatcctac
actgactggttcaagatgtcgtttggcggacgctccggtttccacgccggcagtaagaag
tctctggtgttcctgctgaagttcctctctgacctcgtgccctttgaacctcctcagtac
ttaaaggttcatattcttcaccctccatttgtgcctccaaaacaccgcagcctcctgatg
gagtacgtcacgctggcgaagacccggctggccgacctgcaggagtcggtggaggacatg
ggtttgtatgaagatgtttctgctgccggtgcttcacttcagagccaggctgcgcaggac
gtggagaaagctgtgtgtctgtttgagagcagcggcaggatccctgcaacagtcatggag
gccagcattttccggaggccgtactttctaaccaggttccttcctgcgttgctgaagccc
agagcggtgagaaccttcagtgtgtttgtcagagcggtgagaacctttggtgtgttgagc
agatttttctcgtccttccagcttcctctcgaagccgatgctcagatgaacttcattgaa
gctctgaaacaagcagagaagatcccagctgcccagtattcccagtatgtggagtcctgt
cagaagcgaagacagcagagcggaagccctcagcgccccggagtcccgctggccgttctg
caggagcaactgcaggaattcaccgaactgctggcagcaggacgggacccagagtcgttg
gcccagctgtccaggatttctcacaccctgagtgtcgtgtgtcccggttctgatgacccg
gttggaccggccgccgcccccttgctgcccgagctcctcctgaaggtaaacctggttctg
gttctggaccatgttgggtctgcggttctgaagcgtttgtgttgtgatcttcaggtggct
gatttaattctgcaaagtttctgtcagagtctgctggtcgcttccagaggaaatcctccc
aacagacagagtttgtggggcagcaggttcgtctgcgtgctgctcgataaccggcagctt
ctctccagtgtaatccacagactgaaggatctgtttaaccgacaggcagcttctctgaaa
ccggctcacatcctgggcctggcagccttcatcgtccacctgcaggcggctcagccgggt
ccggcccagccgggtccggtttcggtagaagaggctctgggttcggccgtgttgagcggc
agtcggagcagcatgctgttctctgtcaggctggctgtggctgctgtgtcctatggactc
tgcagaggacagtctgcgtctccacagcgactgcaggactttgtccccaggagcctttat
aaaaagctcctgttcctggtcccaaggctgttccctgaggccaggatacgtccagaggga
caggggggagacggtccaacaggcggccatcttggggacggtctgtctctgctgtggagc
ttcactgatggaaccagctggacgaagacggtgctgcatctgtggagacacgctgccttc
cagcagctgcagcaactgcagctgtaccagttgtgtttttcagagtggctgcatgaagag
ctgagagtccagagaaactcagatgttttgtcggacgcagagcggcaggagtaccagcag
tgggcctgctgggagctttatctgccccggccagaggagcagggaggctgtggtggcgac
cccagggtgctctgctcccgtctgctgaccgccgtcatggagccgccacccagtagggag
atgaacctggaaaacctggacttttctccaggatcgtctggaactggaacctgtttgccg
gacctgctgtccagattacaggagctggtctacgaggcagaggtcggtgaactctcgggt
cgccgggggcatctgggggacttcctgctccgggtcgtgtctgagaaatgctccgcctcc
tctggcagcatctcctccaggctcagcctgcagagaaccatggaggcctggaacagggtg
ctcctgacactgccacccgcgatgttcttcaaaataaaggctgaagcagggcggagcatt
gtagactgtagccagctgctgcagcacatcacacagcttcagaggaaggcgtgtcctcca
gccggcgtgctgccctgcgcggtgacagtacatctcttgaagggcctgctctttgctgtg
ggacagtgtggacgtccagcagcagaagtggaccgtgtctggtccttgatgagcacctcc
tgtcctctcctcctcatctctgcagtgcgttggtggcagcagatttctccggttctggtt
tcactctggattcgcctccaggatgcagaaccttttccagagcagctgcagcttctctca
gcctgccgactctgggcctgcagtctgagagcaggtccggttctggtccagatccctcca
ggtccggttctggtccaagccgccagcctgcatggctccttcagaggcggggcggaaccc
cagcagaacttcagagaggttctggacggactgagagaggctgagaaccagcaggttctg
gtttctctgctctttcttttcgtgacggacttcctgtcagaacttctggatcctcaggag
aaaaattctggaaggtccaaatggttatgctcagaacttctggcggttctggtgaactca
gctgattggctgctgctcttcaggtccaacgaactggacccggaaccggacccagtcacc
ctgacggtctcggatgattgcagccggttgatgccctgggcagtctgcagtttgctgcag
cagcaaagcgccgccttccaccagagggcgctgcgttgccccgggttcctccacagcgcc
accctgtggtacctggcggtgctgcggctcttcctggacggagaggcgccggcctcggcg
cgccaggtggaaccgacccgggttctggaccgcaccaagcagtttgtcctgagtttgatc
cggcaggcgccggcagcggccctgagctgcagccagtggagacagttggagactcgctgt
gcggacctggacccagaactggctgcaactctttcaattcacctggaccatcctagggtg
ggcttcctctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (48)   
   KEGG ORTHOLOGY (1)   
   RefGene (44)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (9)   
   RefSeq(pep) (9)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (2)   
   Pfam (2)   
All databases (72)   

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