KEGG   Xenorhabdus nematophila ATCC 19061: XNC1_0223
Entry
XNC1_0223         CDS       T01274                                 
Symbol
priA
Name
(GenBank) primosomal protein N' (factor Y) directs replication fork assembly at D-loops, ATP-dependent
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
xne  Xenorhabdus nematophila ATCC 19061
Pathway
xne03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xne00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    XNC1_0223 (priA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xne03400]
    XNC1_0223 (priA)
Enzymes [BR:xne01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     XNC1_0223 (priA)
DNA repair and recombination proteins [BR:xne03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     XNC1_0223 (priA)
SSDB
Motif
Pfam: PriA_3primeBD PriA-like_WH PriA_C DEAD ResIII Helicase_C PriA_CRR AAA_30 AAA_19 zinc-ribbons_6 TrwB_AAD_bind AAA_22 Snf7
Other DBs
NCBI-ProteinID: CBJ88311
UniProt: D3VH26
Position
complement(196250..198448)
AA seq 732 aa
MTVVQVVLPVPLARAFDYLLPSELPVPAIGVRVLVPFGKRNAIGVVVGIADSSEFPPEQL
KSVSSVLDTQPLFPDDLWQLLLWSAHYYHYPLGEVLFHAMPVLLRQGKNAEFAPLWQWQI
TTEGRELPLEQLKRSAKQQQALATLRQKPIYRHQVSELELSESALQSLKKKALIALNPVQ
PEAENWHTSFTIIGARLTLNAEQATAVGAIRAEDRTFSPWLIAGITGSGKTEVYLSVLEN
ILAQGKQALILVPEIGLTPQTIRRFRERFKAPIDVLHSALNDSERLAAWLRAKRGENAIV
IGTRSALFTPFARLGMIIIDEEHDGSYKQQEGWRYHARDLAVFRAKKEGIPIIMGTATPA
LETLYNVQQNKYRQLTLTKRAGHAQPATQHLLDLKGLPLTVGLSQPLINRIHEHLKADNQ
VILFLNRRGYSPALLCHECGWIAECQRCDHYYTLHQNHRHLRCHHCDSQRPVPRQCPQCG
STNLMPVGLGTEQLEDGITKLFPNTPITRIDRDTTSRKGALEQQLAEVHQGGARILIGTQ
MLAKGHHFPDVTLVALLDVDGALFSADFRAAERFAQLYTQVSGRAGRAGKRGEVVLQTHH
PEHPLLQVLLEKGYDAFAQQAMEERQQVHLPPFASHILLRSEDHDNQQAPAFLQHMRQLF
EHHPQRDNHLWIMGPVPALQAKRSGRYRWQLMIQHPSRIFLQKIMTGIYPQITAMPQARK
VKWNIDVDPTEG
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgacagttgttcaggttgtgttgcctgtccccctagcccgcgcttttgattatctgtta
ccttcggaattaccggtgccagcgatcggtgttcgcgtactcgtgccatttggcaagcgt
aatgcaatcggtgttgtcgttggtatcgcagacagcagtgaattcccgcctgaacagctc
aaatccgtttcctctgtccttgatacacagccactttttcctgacgatctctggcaatta
ctcctctggtcagcccactattatcattatccactgggggaagtgttgtttcatgccatg
cccgtcttactgcggcaggggaaaaatgcagaatttgcgcctctgtggcaatggcaaatc
accacggaaggccgggagctgccacttgaacagctcaagcgctccgccaaacaacaacag
gctttagccactttgcgccaaaagcccatttatcgtcaccaggtttctgaattggaatta
agtgaaagtgcactgcaatcactgaaaaagaaagcactgatcgcactgaaccccgtacaa
ccagaagcagaaaactggcatacatcgtttacaattatcggtgcacgattaacactcaat
gcagaacaagccactgcggtaggtgctatccgcgcagaagatagaacgttttccccgtgg
ttaattgcaggcatcaccggctcaggcaaaacagaagtgtatctcagtgtgctggaaaat
attctggcacaaggcaaacaggcactgattctggtacctgaaattggtttgacaccacaa
actattcgtcggtttcgggaacgtttcaaggcaccaattgatgttctgcactcagccctg
aatgacagtgagcgactggcggcttggctacgggctaaacgaggagaaaatgccatcgtc
atcgggacgcgttctgccttattcacgccttttgcccggctggggatgatcattattgat
gaagaacatgatggatcttataaacaacaggaaggctggcgctatcatgcccgtgatctg
gcggtattccgggccaaaaaagagggcattccgattattatgggaacagccacccctgcg
ctggaaacgttatacaatgtgcaacagaataaatatcgccaactgacattaaccaaacgg
gcaggccatgcccaacctgcaacccagcatttactggacttgaaagggttgccgctcacc
gttggtttatcgcaaccgcttatcaaccgcattcacgaacatctcaaggcggataatcag
gttatcctgttcttaaatcgccgtggttattctcccgccttactctgccacgaatgcggc
tggatagcggaatgtcagcgctgtgatcattattacacgctgcaccaaaaccatcgtcac
ttacgctgccatcactgtgacagccaacgtcctgtcccacgtcaatgcccccaatgcggc
tcgactaacttaatgccggttggcctgggtacagaacaactggaagacggcataacaaaa
ctgttcccaaatacgccaatcacccgcatagatcgtgataccaccagccgcaaaggtgca
ctagagcagcaacttgcggaggttcaccaaggtggagcccgcattttgattggcacccaa
atgttagctaaaggtcatcattttcctgacgtgacactcgtcgccttgcttgatgttgat
ggtgcattgttttctgccgattttcgcgctgccgaacgcttcgcccaactctatacccag
gtctccggtcgggcagggcgagcgggcaaacggggagaagtggtcctgcaaacccaccat
cctgaacacccgcttttacaagtattattggaaaaaggctacgatgcctttgcccaacaa
gcgatggaagaacgacaacaagtgcatctgccaccttttgccagccacatcctgctccgt
tcggaagatcacgacaatcaacaggcacccgcatttttgcaacacatgcgccaactgttt
gaacatcacccgcagcgtgataaccatttatggataatgggccccgtgccagcattacaa
gccaaacgaagcgggcgttaccgctggcaactgatgattcaacatccttcgcgcattttc
ctccagaaaataatgacgggcatatatccacaaatcacggccatgccacaagcccgcaaa
gtaaaatggaatattgacgttgatcccaccgaaggctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (23)   

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