KEGG   Xenorhabdus nematophila AN6/1: XNC2_4108
Entry
XNC2_4108         CDS       T03752                                 
Symbol
holC
Name
(GenBank) DNA polymerase III, chi subunit
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
xnm  Xenorhabdus nematophila AN6/1
Pathway
xnm03030  DNA replication
xnm03430  Mismatch repair
xnm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xnm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    XNC2_4108 (holC)
   03430 Mismatch repair
    XNC2_4108 (holC)
   03440 Homologous recombination
    XNC2_4108 (holC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xnm03032]
    XNC2_4108 (holC)
   03400 DNA repair and recombination proteins [BR:xnm03400]
    XNC2_4108 (holC)
Enzymes [BR:xnm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     XNC2_4108 (holC)
DNA replication proteins [BR:xnm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     XNC2_4108 (holC)
DNA repair and recombination proteins [BR:xnm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     XNC2_4108 (holC)
SSDB
Motif
Pfam: DNA_pol3_chi
Other DBs
NCBI-ProteinID: CEK25095
Position
I:4098012..4098491
AA seq 159 aa
MKNATFYLLEKLPSEKRLPEQSSFSDDLQPHEWMACQLAADQWRAGKRVLIACESQQQAE
KLDEALWQREPSQFVPHNLAGEGPRYGAPVELCWPQKRSNAPRDVLVTLLPHFADFATAF
HEVIDFVPIDENLKQLARERYKSYRSVGFNLTMATPPIY
NT seq 480 nt   +upstreamnt  +downstreamnt
atgaaaaacgccaccttctatttgttagaaaagctgccatcggaaaagcggttaccggaa
caatcatcgttttctgatgatttacagccacatgaatggatggcatgtcagcttgctgct
gatcagtggcgtgcagggaagcgggttctgattgcttgtgaaagccagcaacaggccgaa
aaactggacgaagcgttatggcagcgagagccgagccaatttgtaccgcacaaccttgcc
ggagaaggtccccgttatggcgctcctgtagaattatgctggccacaaaaaagaagcaat
gcgcctcgcgatgtgctggtgacattacttccccactttgcagactttgccacagctttc
catgaagtgatagacttcgtccctattgatgaaaatctgaaacagttagctcgcgaacga
tataaatcttatcgtagcgtcggctttaatttgaccatggcaactccgccaatctattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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