KEGG   Xanthomonas oryzae pv. oryzae PXO86: AZ54_02775
Entry
AZ54_02775        CDS       T03765                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
xoy  Xanthomonas oryzae pv. oryzae PXO86
Pathway
xoy03030  DNA replication
xoy03410  Base excision repair
xoy03420  Nucleotide excision repair
xoy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xoy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AZ54_02775
   03410 Base excision repair
    AZ54_02775
   03420 Nucleotide excision repair
    AZ54_02775
   03440 Homologous recombination
    AZ54_02775
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xoy03032]
    AZ54_02775
   03400 DNA repair and recombination proteins [BR:xoy03400]
    AZ54_02775
Enzymes [BR:xoy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AZ54_02775
DNA replication proteins [BR:xoy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AZ54_02775
DNA repair and recombination proteins [BR:xoy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     AZ54_02775
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AZ54_02775
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc Glyco_hydro_32C
Other DBs
NCBI-ProteinID: AJQ81673
Position
573078..575879
AA seq 933 aa
MSRLVLIDGSSYLYRAFHALPPLTNAQGEPTGALFGVVNMLRATLKERPAYIAFVVDAPG
KTFRDALYADYKANRPSMPDDLRAQVQPMCDIVHALGIDILRIDGVEADDVIGTLALQAA
ADGLSVTISTGDKDFAQLVRPGIELVNTMSGSRMDSDAAVIAKFGVRPDQIVDLLALMGD
TVDNVPGVEKCGPKTAAKWLAEYDSLDGVIANADKIKGKIGDNLRAALPRLPLNRELVTI
KTDVTLASGPRALDLREPNTETLAVLYARYGFTQALRELGGALAQSGLLSEPVALGAAAA
TARTEPGRARGTGFVSGPVNAAVDLDPALSAPGAYETILTQEQLDSWIAQLRAAGQFAFD
TETDSLDPLQADLIGLSVAAEPGKAAYLPFGHNFPGAPVQLDRTHALAQLAPLLTDPAVR
KVGQHGKYDLHVMRRHGVELAGYADDTLLESFVLNSGSARHDMDSLAKRYLGYDTVKYED
VCGKGAKQIPFAQISLDDATRYAAEDADITLRLHHVLGPKLAAEPGLERVYRDIEMPLVD
VLARIEANGVCVDAAELRRQSADLSKRMLAAQQKATELAGRTFNLDSPKQLQALLFDELK
LPAVVKTPKGQPSTNEDALEAIADQHELPRVILEYRGLSKLRSTYTDKLPEMIHPQSGRV
HTSYHQAGAATGRLSSSDPNLQNIPIRTEDGRRIRRAFVAPPGRKLIACDYSQIELRIMA
HLSGDPGLVGAFASGTDVHRATAAEVFGRTIDTVSGDERRAAKAINFGLMYGMSAFGLAR
QLGIGRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQ
RAGAERAAINAPMQGTAADIIKRAMVKVDGWIADHAQRAKMILQVHDELVFEADVDFVDT
LLSEVTTRMASAAELRVPLVVDSGVGDDWDQAH
NT seq 2802 nt   +upstreamnt  +downstreamnt
atgagcagattagtcctgatcgacgggtccagttacctgtatcgcgcgttccacgcgctt
ccgccgctgaccaatgcgcagggcgaacccaccggcgccttgttcggcgtggtcaacatg
ctgcgcgccaccttgaaggaacgtccggcctacatcgccttcgtggtggatgcacccggc
aagaccttccgtgacgccttgtatgccgactacaaggccaaccggccgtcgatgcccgac
gacctgcgcgcgcaggtacagccgatgtgcgacatcgtgcatgcgctgggcatcgacatc
ctgcgcatcgacggcgtggaagccgacgatgtgatcggcacgctggcgctgcaggccgct
gccgatgggttgagcgtgaccatctccaccggcgacaaggactttgcccagctggtgcgc
ccgggtatcgaactggtcaacaccatgagcggcagccgcatggattcggacgcggcggtg
atcgccaagttcggcgtgcggcccgaccagatcgtcgacctgctggcgctgatgggcgac
accgtcgacaacgtgcccggcgtggaaaaatgcggtcccaagactgccgccaaatggctt
gccgaatacgattcgctggacggcgtgatcgccaatgccgacaagatcaagggtaagatc
ggcgacaacctgcgcgctgcgttgccacgcctgccgctcaaccgtgagctggtcacgatc
aagaccgatgtgaccctggccagcggcccgcgcgcgctggatctgcgcgaacccaacacc
gaaacgctagcggtactgtacgcgcgctacgggtttacccaggcgctgcgcgagctgggc
ggcgcgctggcgcagtccggtctgttgtccgagccggtggcgctgggcgctgccgctgct
accgcgcgcaccgagccgggccgtgcgcgcggcaccggcttcgtgtccgggccggtcaat
gcagcggtggacctggatccagcgctgtcggcgcctggcgcgtacgagaccatcctgacc
caggagcagctggacagctggatcgcgcagctgcgcgccgccggccagttcgctttcgat
accgaaaccgacagcctggacccgctgcaggccgacctgatcggcctgagcgtggccgcc
gagccaggtaaggcggcgtatctgccgttcggccacaactttcccggcgccccggttcag
ctcgaccgcacccatgcgctggcgcaactggcgccgctgctcaccgacccggccgtgcgc
aaagtcggccaacacggcaagtacgacctgcacgtgatgcgccggcatggcgtggagctt
gccggctacgccgacgacacactgctggagagcttcgtgctcaattccggcagcgcccgt
cacgacatggacagcctggccaagcgctatctcggctacgacaccgtcaagtacgaagac
gtttgcggcaagggcgccaagcagatcccgttcgcccagatcagcctggacgatgccacc
cgctacgccgccgaagacgccgacatcaccctgcgcctgcatcacgtgctcggccccaag
ctggcagccgagcccggcctggagcgcgtctaccgcgacatcgaaatgccactggtggac
gtgctggcgcgcatcgaagccaacggcgtgtgcgtggacgccgccgaactacgccgtcag
agcgcggacctgtccaagcgcatgctcgccgcccagcaaaaagccaccgagctggcaggg
cgcaccttcaacctggattcgcccaagcagctgcaggcgctgttgttcgacgagctcaag
ctccccgccgtggtcaagacgcccaagggccagccctcgaccaacgaagacgcgctggaa
gccatcgccgaccagcacgagctgccgcgggtgatcctggaataccgcggcctgagcaag
ctgcgcagtacctacaccgacaagctgccggagatgatccacccgcagtccggacgcgtg
cacaccagctaccaccaggccggcgccgccaccggtcggctgtcttcatcggacccgaac
ctgcagaacatcccgatccgcaccgaagacggccgccgcatccgccgcgctttcgtcgcc
ccgcccgggcgcaagctgatcgcctgcgactactcgcagatcgagctgcgcatcatggcc
cacctgtccggcgaccccggcctggtcggcgcgttcgcgtccggcaccgacgtgcaccgc
gccactgccgccgaagtattcggccgcaccatcgacaccgtcagcggtgacgagcgccgc
gctgccaaggcgatcaacttcggcctgatgtacggcatgagcgcgttcggtctggcccgc
cagctcggcatcggccgtggcgaagcgcaggactacatcgcgctgtacttcagccgctat
ccgggcgtgcgcgacttcatggaaaccacccgccagcaggcgcgcgacaagggctacgtg
gaaaccgtgttcggccgccgcctgtatctggatttcatcaatgccggcagccagggccag
cgtgcaggcgccgagcgcgccgccatcaacgcgccgatgcagggcaccgccgccgacatc
atcaagcgcgccatggtcaaggtggacggctggatcgccgaccacgcgcaacgcgccaaa
atgatcctgcaggtgcacgacgaactggtgttcgaagccgatgtcgatttcgtcgacaca
ctgctcagcgaagtcaccacgcgcatggcctccgcagctgaattgcgcgtgccgttggtg
gtggattcgggcgtgggcgatgactgggatcaggcgcactga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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