KEGG   Xanthomonas oryzae pv. oryzae PXO86: AZ54_10275
Entry
AZ54_10275        CDS       T03765                                 
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
xoy  Xanthomonas oryzae pv. oryzae PXO86
Brite
KEGG Orthology (KO) [BR:xoy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:xoy03016]
    AZ54_10275
Enzymes [BR:xoy01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     AZ54_10275
Transfer RNA biogenesis [BR:xoy03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    AZ54_10275
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM TRAM_2
Other DBs
NCBI-ProteinID: AJQ82947
Position
complement(2106594..2108048)
AA seq 484 aa
MPGTSVSDLSTATAVDAPALLPLPVARPSAPSVVRGKLYIKTHGCQMNEYDSAKMADVLA
ASEGLELTDNPEEADVVLVNTCSIREKAQEKVFSQLGRWKALKAGGKPVIIGVGGCVASQ
EGEAIVKRAPYVDLVFGPQTLHRLPELIRARRESGKSQVDISFPEIEKFDRLPEPRAEGP
SAFVSIMEGCSKYCSFCVVPYTRGEEVSRPFEDVLVEVAQLAAQGVREINLLGQNVNAYR
GAYGADAGDAAQYADLGLLIRTIAQIEGIGRIRFTTSHPLEFSDSLVDAYRDVPQLANYL
HLPVQAGSDRILSAMKRGYTALEFKSRIRKLRAVRPDISISSDFIVGFPGETEADFEKTM
KLIEDVGFDQSFSFVYSRRPGTPASDLQDDTPETVKQARLARLQAHISAHAASISQSMVG
SMQRVLVEGPSRRDPNELTGKSENMRPVNFPGNPRLIGQFVDVLITEAMSNSLRGRIQLD
DSAH
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgcccgggacatccgtttccgatctgtccacggccaccgccgtggatgcacccgccctg
ctgcccttgcccgtggcgcgcccttccgcgccttccgtggtgcgcggcaagctctatatc
aagacccacgggtgccagatgaacgagtatgactcggcaaagatggccgacgtgctcgcc
gcctccgaaggcctggagctgaccgataacccggaagaagcggatgtggtgctggtcaac
acctgctccattcgcgaaaaggcgcaggaaaaggtcttcagccagttggggcgctggaag
gcgctgaaggccggcggcaagccggtgatcatcggcgtcggcggctgtgtggcgtcgcag
gaaggcgaagccatcgtcaaacgtgcgccctatgtagacctggtgttcggcccgcagacg
ctgcaccgcttgccggaattgatccgcgcacggcgcgaatcgggcaagtcgcaggtggac
atcagcttcccggagatcgagaagttcgaccgcctgcccgagccgcgtgccgaaggcccg
tcggcgttcgtctcgatcatggaaggctgctccaaatactgctcgttctgcgtggtgcct
tacacccgtggcgaagaagtcagccggccgttcgaagacgtgctggtggaagtggcgcaa
ttggcggcgcaaggcgtgcgcgagatcaacctgctcggccagaacgtcaacgcgtaccgc
ggtgcatatggcgccgatgccggcgacgccgcgcagtacgccgatctgggcctgctgatc
cgcaccatcgcgcagatcgagggcatcggccgcatccgcttcaccacctcgcatccgctg
gagttttccgattcgctggtggatgcctatcgcgatgtgccgcagctggccaactacctg
cacctgccggtacaggcgggcagcgaccgcattctgtcggcgatgaagcgcggctacacc
gcgctggaattcaaatccaggatccgcaagctgcgtgcggtgcgcccggatatttcgatc
agttcggatttcatcgtcggcttccccggcgaaaccgaagcggacttcgaaaagaccatg
aagctgatcgaggacgtgggcttcgaccagagcttttcgttcgtgtattcgcgtcgtccc
ggcaccccggcatcggacctgcaagacgacacgccggagacggtgaagcaggcgcgtctt
gcacgtctgcaggcgcacatcagcgcgcacgcggcgagcatttcgcaatcgatggtgggc
agcatgcagcgcgtgctggtggaaggcccctcgcggcgcgacccgaacgaattgaccggc
aagagcgaaaacatgcgcccggtgaatttcccgggcaacccgcgtttgattgggcagttc
gtggacgtgttgatcaccgaggcgatgagcaattcgctgcgtggtcgcattcaactggac
gacagcgcgcactga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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