KEGG   Xenopus tropicalis (tropical clawed frog): 100036727
Entry
100036727         CDS       T01011                                 
Symbol
spon1
Name
(RefSeq) spondin-1 precursor
  KO
K24427  spondin-1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:xtr04990]
    100036727 (spon1)
Domain-containing proteins not elsewhere classified [BR:xtr04990]
 Thrombospondin domain-containing proteins
  F-spondins
   100036727 (spon1)
SSDB
Motif
Pfam: TSP_1 TSP1_spondin Spond_N Reeler TSP1_CCN TSP1_ADAMTS
Other DBs
NCBI-GeneID: 100036727
NCBI-ProteinID: NP_001090741
Xenbase: XB-GENE-991006
UniProt: A1L1E3
Position
4:complement(16777963..16992030)
AA seq 803 aa
MGLIFQPLFLQFVAASYALMVLGFLDETVEKAIKSEGYCSRILRAQGSTRKEGYNEFSLR
VEGDPEFYKPGNTYRVTLLAASPAYFRGFTLIALKEGKEGEKEEDHAGTFQIIDDEDTQF
MSNCPVAVTESTPRRRTRIQVLWTAPPIGSGCVILKASIVQKKIIYFQDEGSLTKRMCEP
DLTLEGGNEKPIPDCCACGTAKYRLTFYGNWSEKTHPKDYPRRANHWSAIIGGSHSKEYV
LWEYGGQASDGVKQVAELGSPVKMEEEIRQKGDEVLTVIKAKAQWPAWQPLNVRAAPSAE
FSVDRSRHLMSFLAMMGPSPDWNVGLSSEDLCTKECGWVQKVIQDLIPWDAGTDSGVTYE
SPNKPSIPQDKIRPLTSLDHPQSPFYDPEGGPIIPVARVVIERIARKGDQCNIVPDNVDD
IVPDLVTEEKEEDDTPETCIYSNWSPWSACSSATCDKGKRMRQRMLKAQLDLSVPCPDTQ
DFEPCMGPGCSDDEASTCMMSEWITWSPCSASCGMGMRSRERYVKQFPEDGSMCKVPTEE
TEKCIVNEECEPSSCIVTEWAEWEECSATCGMGMKKRHRMIKMTPADGSMCKADTTEVEK
CMMPECHTIPCVLSPWSEWSDCSVTCGKGTRTRQRMLKSPAELGDCNEELKQVEKCMLPE
CPISCELTEWSYWSECNKSCGKGHMIRTRMITMEPQFGGAVCPETVQRKKCRLRKCQKSS
GNERRRLKEAREKRRSEKTKEDADGEQYPVCKMKPWTAWTECTKFCGGGIQERFMTVKKR
FKSSQFTSCKDKKEIRACNVHPC
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgggactgattttccagcctctgttcttgcagtttgtggcagcgtcgtacgctttaatg
gtgcttggctttctggacgaaacagtagaaaaagctataaaatccgaggggtattgtagc
agaatcctacgagcgcagggaagcacaaggaaagaaggttacaatgaatttagcctgaga
gtggaaggggaccccgaattctacaaaccaggaaacacttacagagtaactctcctagct
gccagcccagcctacttcagaggattcacactaattgcactgaaagaaggaaaagaagga
gagaaggaagaagaccacgcaggtaccttccagattattgatgatgaagatactcagttt
atgagcaactgcccagtggcggtgacagagagcacgccaaggcgaagaacgaggatccag
gtgttatggacagcgcccccaataggatcgggctgtgtgatactcaaggcgagcattgta
cagaaaaaaatcatttacttccaggatgagggatctcttaccaagaggatgtgtgagcca
gacttgacactggaagggggaaatgagaagccaatcccagattgttgtgcctgtgggaca
gctaaatacaggctaacgttctatggaaactggtcagagaagacacatccaaaggactat
cccagacgagccaaccactggtctgcaataattggcgggtcccattcaaaggaatatgtt
ctttgggagtatggagggcaagccagtgacggtgtcaagcaagtagctgagttgggttct
ccagtcaaaatggaagaagaaatacggcaaaagggagatgaagtgctgaccgtaatcaaa
gccaaagcgcagtggccggcctggcagcccctcaatgtgagggctgccccttcagctgag
ttctcagtggacagaagccgtcacctgatgtccttcctggccatgatgggtcccagccca
gactggaacgtaggcctttcctctgaggatctctgtaccaaagagtgcggctgggtccag
aaggtcatccaagatttgatcccatgggatgcaggcactgacagtggggtaacctatgag
tccccgaacaagccctccattccccaggataaaatccgacccctgaccagcctggatcac
ccgcagagccctttctacgacccggagggcggcccaatcatacccgtagctcgagtcgtg
attgaaagaattgcgagaaagggagaccagtgcaatattgtgcccgacaatgtggacgac
atagtgccagatctggtaacggaagagaaggaggaagatgacaccccagagacctgcatc
tattccaactggtccccctggtcggcctgcagctcagcaacctgcgacaagggcaagcgg
atgagacagcgaatgttaaaggctcagttagacctcagcgttccctgcccagacactcag
gactttgaaccctgcatgggtcccggctgtagcgatgatgaagcctctacctgcatgatg
tcagagtggatcacctggtcgccatgtagcgcctcctgcgggatgggaatgagatcaagg
gagcgatacgtcaagcagttcccagaagacggctccatgtgtaaagtcccaactgaagag
actgagaaatgcattgtcaacgaggagtgcgagccgagcagctgcatagtcacggagtgg
gcagagtgggaggagtgcagcgccacgtgcgggatgggtatgaagaagcgccaccggatg
ataaagatgactccagcagatggatccatgtgtaaagccgacacaacggaggtggagaaa
tgcatgatgcccgagtgtcatactatcccatgcgtgctgtcaccttggtccgaatggagt
gattgcagcgttacctgtggcaaaggtaccagaaccagacagagaatgttaaagtccccg
gcggaacttggagattgcaacgaggaactgaaacaagtggaaaagtgcatgctccctgaa
tgccctataagctgtgaactgactgagtggtcttactggtcggagtgtaataaatcgtgc
ggtaagggtcatatgattcgcacgcgaatgatcacaatggagccacagtttggaggcgcc
gtctgcccggaaaccgtacaacgcaaaaaatgcagattacgaaaatgtcaaaaaagttcc
gggaatgagcgaaggcgtttaaaggaagcccgagagaaaagaaggagtgaaaaaaccaag
gaagatgcagatggagaacagtaccctgtatgtaaaatgaaaccatggactgcatggacg
gaatgtaccaaattctgcggcgggggcatccaggagaggttcatgactgtgaagaagagg
ttcaaaagctcccagttcactagctgcaaagacaagaaggagatacgggcttgcaacgtc
catccatgttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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