KEGG   Xenopus tropicalis (tropical clawed frog): 100038089
Entry
100038089         CDS       T01011                                 
Symbol
vegfa
Name
(RefSeq) vascular endothelial growth factor A precursor
  KO
K05448  vascular endothelial growth factor A
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04010  MAPK signaling pathway
xtr04020  Calcium signaling pathway
xtr04370  VEGF signaling pathway
xtr04510  Focal adhesion
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    100038089 (vegfa)
   04370 VEGF signaling pathway
    100038089 (vegfa)
   04020 Calcium signaling pathway
    100038089 (vegfa)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100038089 (vegfa)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:xtr04052]
    100038089 (vegfa)
   00536 Glycosaminoglycan binding proteins [BR:xtr00536]
    100038089 (vegfa)
Cytokines and neuropeptides [BR:xtr04052]
 Cytokines
  Growth factors (RTK binding)
   100038089 (vegfa)
Glycosaminoglycan binding proteins [BR:xtr00536]
 Heparan sulfate / Heparin
  Growth factors/receptors
   100038089 (vegfa)
SSDB
Motif
Pfam: PDGF VEGF_C
Other DBs
NCBI-GeneID: 100038089
NCBI-ProteinID: NP_001107704
Xenbase: XB-GENE-485744
UniProt: B0BMQ3
Position
5:1641336..1679701
AA seq 311 aa
MNFLPSWIHWGLAVLLYIPHAQLSGAAPMPGEGDHKPTEVVKFLKVYERSMCQVREILVD
IFQEYPDEVEYIFKPSCVPLMRCAGCCNDESLECVPTESYNITMQIMKIKPHISQHIMDM
SFQQHSQCECRPKKEVKSKQENHCEPCTEKSQRKHLFVQDPQTCKCSCKNTDSRCKARQL
ELNERTCRLVSTARGTHQYQYQYQLGPGRAASSCSLAGAGTAMLHSQLCLPVRPIALPAI
ASMHPILSPTLPHALPLATVSVLSRGGSQSLWENPIPLTTAPHSHSLSHTLTHSHSHSLT
LSLSHTLSLTH
NT seq 936 nt   +upstreamnt  +downstreamnt
atgaactttctgccgagctggatccactggggcttggctgtattgctctacataccccat
gcccagttgtccggggcagcccctatgccaggcgagggagaccataaaccaacagaagtg
gtgaagttcctaaaagtgtacgagcgcagtatgtgccaagtgcgggagatcctggtcgat
atattccaggaatacccggacgaggtggagtatatcttcaagccgtcctgcgtgccgctg
atgagatgtgcgggttgctgcaacgacgagagcttggaatgtgttcctacggaaagttac
aacatcaccatgcagataatgaaaatcaagcctcacataagccaacatatcatggatatg
agctttcagcagcacagtcagtgtgaatgcagaccaaagaaagaagtaaagagcaagcag
gaaaatcattgtgagccttgcacagagaaatcccagagaaaacacttgtttgtccaagat
ccccagacatgtaaatgctcctgtaaaaacacagactcacgttgcaaagcgaggcagcta
gagttaaacgagaggacttgcaggttggtttctactgcacgtgggacacaccagtaccag
taccagtaccagttgggcccgggtagggcggcttcttcctgctcattggctggggcgggt
actgccatgctacactctcagctctgtctccctgtgcgccctattgctctgcccgccatt
gcctctatgcaccctatcctgagcccaactctgccccatgcacttcccttagcaacagtc
tccgtactgagccggggggggagccagagcctttgggagaatccaattccccttactact
gcccctcactcacactcactgtcacacactctcactcactcacactctcactcactcaca
ctctcactctctcacactctctctcttactcactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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