KEGG   Xenopus tropicalis (tropical clawed frog): 100038121
Entry
100038121         CDS       T01011                                 
Symbol
cbx3
Name
(RefSeq) chromobox protein homolog 3
  KO
K11586  chromobox protein 3
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    100038121 (cbx3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xtr03041]
    100038121 (cbx3)
   03036 Chromosome and associated proteins [BR:xtr03036]
    100038121 (cbx3)
Spliceosome [BR:xtr03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    100038121 (cbx3)
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     100038121 (cbx3)
  Heterochromatin formation proteins
   HP1 (heterochromatin protein 1)
    100038121 (cbx3)
SSDB
Motif
Pfam: Chromo_shadow Chromo Mtf2_C
Other DBs
NCBI-GeneID: 100038121
NCBI-ProteinID: NP_001116264
Xenbase: XB-GENE-492315
UniProt: B1H306
Position
6:41664480..41676004
AA seq 174 aa
MGKKQNGKGKKVEEAEPEEFVVEKVLDRRVVNGKVEYYLKWKGFTDSDNTWEPEENLDCP
ELIEAFLNSQKAGKEKPDSNKRKSVSDSESEDSKSKKKRETVDKPRGFARGLDPERIIGA
TDSSGELMFLMKWKDSDEADLVPAKEANVKCPQVVIAFYEERLTWHSCPEDEAQ
NT seq 525 nt   +upstreamnt  +downstreamnt
atgggaaagaaacagaatggcaagggcaagaaagtggaggaagcagagcctgaagaattt
gttgtagaaaaagttctggacagacgtgtagtaaatggaaaggttgaatattatctcaaa
tggaaaggtttcacagattcagacaacacatgggaacctgaagaaaacttagactgtcca
gagttgattgaagcctttcttaattctcagaaagcaggaaaagaaaaaccagacagcaac
aaaagaaaatctgtgtcagatagtgaatctgaagatagtaaatcaaagaaaaaaagggaa
actgttgataaaccacggggctttgcaagaggtctggatccagagagaataattggagct
acagacagcagtggtgaattaatgtttcttatgaaatggaaagattcagatgaagcagat
ctggtgcctgctaaagaagcaaatgtaaagtgtcctcaggtcgttattgcattttatgaa
gaaagattaacttggcattcttgtccagaggatgaagcacaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (12)   
   RefSeq(nuc) (6)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

Download RDF
DBGET integrated database retrieval system