KEGG   Xenopus tropicalis (tropical clawed frog): 100038201
Entry
100038201         CDS       T01011                                 
Symbol
irx5
Name
(RefSeq) iroquois-class homeodomain protein irx-5
  KO
K24889  iroquois-class homeodomain protein IRX
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xtr03000]
    100038201 (irx5)
Transcription factors [BR:xtr03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain TALE
    100038201 (irx5)
SSDB
Motif
Pfam: Homeobox_KN Homeodomain
Other DBs
NCBI-GeneID: 100038201
NCBI-ProteinID: NP_001165398
Xenbase: XB-GENE-484376
UniProt: A0A803JFD6
Position
4:42285034..42288965
AA seq 486 aa
MCLAMSYPQGYLYQPSASLALYSCPAYSTTVISGPRTDELGRSPSGSAFSPYAGSTAFTA
SSAGFNSPLQYSGDPAAAFTSYVGSPYDHSAGMAGSLGYHPYAAPLGTYPYGDPAYRKNA
TRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWT
PRNRSEDEEDDENIDLEKNEEDDPRKLEEKGDQDGDAGDQKRSPSAVDFDRLEGEVRQGK
ELDQTRSDSEQNEVEERNDLLSKNSAPPTSPLCPPDQSPQAQEDQNLHRHTVHNHHHQSI
QQLHHHSHQSHPLDLVHRNALVQHGPVTNNATSVIHSPPASTSKPKLWSLAEIATSSDKV
KESSDAAAVAGTTPAQSMVVSASSPSRSPSAQCHFPSNTVLSRPLYYSNPFYPGYTNYGT
FSHLHSHHGPSTTSPTVNSTHHFSGINQTVLNRAEALAKECKLRSQSQADLNKDTPYEMK
KGMSSI
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgtgtcttgccatgtcctatcctcagggctacttataccaaccatctgcttctttggct
ctgtactcctgccctgcttacagcaccactgtcatctctggacccaggactgatgagctt
gggaggtccccttctggctctgccttctcaccttacgctggatctacagctttcactgcc
agctctgctggcttcaactctcccctccagtacagcggggacccagctgctgcctttact
tcctatgtgggctctccgtatgatcacagcgctggcatggctggatcattaggatatcac
ccatatgctgctcctttgggaacgtatccttatggcgacccagcgtacaggaaaaatgcc
accagagatgcaactgccactttgaaggcctggctcaacgaacacaggaagaatccttac
cccacaaagggcgagaagattatgttggctattattactaagatgaccctaactcaagtg
tccacctggtttgctaacgcaaggaggaggctaaaaaaagaaaataaaatgacatggact
ccgagaaacaggagtgaggatgaggaggatgacgaaaatattgatctggaaaaaaatgaa
gaagacgatccaagaaaacttgaagagaagggggaccaagatggagatgcaggggatcaa
aagaggagccctagtgcggtggattttgacaggttagaaggtgaagtacgtcagggtaag
gagctggaccagacaaggagcgattctgaacagaacgaagtagaggaaagaaatgatctt
ctgtccaaaaactctgctccccccacctcacccctgtgccctccagatcagtccccgcag
gcccaagaagatcagaacttgcatcgtcacactgttcacaaccaccaccaccagtcaatc
cagcaactacatcaccacagtcaccagtctcatccattagacctggtgcataggaacgct
cttgtccaacatggcccagtcaccaacaatgccacctcagttatccactccccaccagct
tccacctcaaagcctaaactctggtcactggcagagatagcaacttcttcggacaaagtc
aaagaaagcagcgatgctgctgcagttgcagggaccactccagcccagtctatggttgtt
agtgcctcttctccatccagatcaccttcggcacaatgccatttccccagcaacaccgtt
ctgtctcgtcccctttattacagcaatcccttttaccctggttatacgaactatggcact
ttcagtcaccttcacagccaccatggacctagcacaactagcccaacggttaacagcacc
catcatttcagtggaataaaccagactgtattaaacagagccgaggctttggccaaagag
tgcaaacttagaagccagtcacaagctgacctaaacaaagacacgccttatgaaatgaag
aaaggtatgtctagcatttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (48)   

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