KEGG   Xenopus tropicalis (tropical clawed frog): 100127824
Entry
100127824         CDS       T01011                                 
Symbol
homer1
Name
(RefSeq) homer protein homolog 1
  KO
K15010  homer
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04068  FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    100127824 (homer1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:xtr03037]
    100127824 (homer1)
Cilium and associated proteins [BR:xtr03037]
 Other cilia and associated proteins
  Stereociliary proteins
   100127824 (homer1)
SSDB
Motif
Pfam: WH1 DAHL CALCOCO1 DUF1664 GAS MAD TACC_C ING CCDC138_cc DUF4763 ATG16 ATG17_like NPV_P10 DUF1465 Nuf2_DHR10-like Exonuc_VII_L FUSC DUF3584 Nsp1_C LXG FUT8_N_cat IFT57 TMF_TATA_bd
Other DBs
NCBI-GeneID: 100127824
NCBI-ProteinID: NP_001106603
Xenbase: XB-GENE-5807410
UniProt: A9JTQ6
Position
1:complement(185951653..186004550)
AA seq 355 aa
MGEQPIFSTRAHVFQIDPNTKKNWVPTSKHAVTVSYFYDSTRNVYRIISLDGSKAIINST
ISPNMTFTKTSQKFGQWADSRANTVYGLGFSSEHHLTKFAEKFQEFKEAARLAKEKSQEK
MELTSTPSQESAGGDLQSPLTPESINGTDDERTTPDVTPNSEPRAEPTQNALPFTHSSAI
NKHWEAELATLKGNNAKLTAALLESTANVKQWKQQLAAYQEEAERLHKRVSELECLSNQA
NAVQSHKTELNQKIQELETTLKKKEEEIERLKEEVEHAKELQDQKDSLSQKLQEVETHNK
DMEGQLSDLEQRLEKSQNEQDAFRNNLKTLLEILDGKIFELTELRDNLAKLIECS
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgggcgagcaacccatctttagcaccagagcccatgtcttccagatagaccccaacact
aagaagaactgggttccaaccagcaagcatgccgtcacagtgtcctatttttatgatagc
acaagaaatgtctacaggataataagtctggatggatcaaaggcaataataaacagcacc
atcagtccaaacatgacattcacaaagacatcccagaagtttgggcagtgggcagacagc
cgggctaatacagtctatggcctgggattctcctctgaacatcatctcactaaatttgca
gaaaaatttcaggaatttaaagaagcagctcgattagcaaaggagaaatcccaggaaaag
atggaattaactagtacgccttcccaggagtctgctggaggagacctccaatcaccgtta
acaccagaaagcatcaatggaacggacgatgaaaggacaactccagatgtgacgccaaac
tccgaaccaagggctgaacctacgcagaacgcattgccatttacacacagttctgcaatc
aacaagcattgggaagcagaactggctacacttaaaggaaataatgccaaactcacagca
gccttgctggagtctactgccaatgtgaaacaatggaagcaacagcttgcggcctatcaa
gaggaagcagagcgtctacacaagcgggtgagcgaattagaatgtctgagcaatcaagct
aatgctgtgcagtctcacaagacagaactgaaccagaagatacaagaattagaaaccacg
ctgaagaagaaagaagaggagatagaaagattgaaagaagaggttgaacatgctaaagag
ttgcaagaccagaaagattctttgagccaaaaattacaggaggtagaaacccataacaaa
gacatggaaggacagttaagtgacttagagcaacggttggagaaaagtcagaacgagcag
gacgctttccgcaataacttgaagacacttttagaaatcctggatggaaaaatctttgaa
ctcaccgaactgcgagacaacctggccaaactgatagagtgcagctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (23)   
   Pfam (23)   
All databases (43)   

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