KEGG   Xenopus tropicalis (tropical clawed frog): 100135098
Entry
100135098         CDS       T01011                                 
Symbol
dsc3
Name
(RefSeq) desmocollin 3 precursor
  KO
K07602  desmocollin 3
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:xtr04515]
    100135098 (dsc3)
Cell adhesion molecules [BR:xtr04515]
 Cadherins
  Major cadherins
   100135098 (dsc3)
SSDB
Motif
Pfam: Cadherin Cadherin_pro Cadherin_3 CADH_Y-type_LIR Big_9 Cadherin_4 Mucin
Other DBs
NCBI-GeneID: 100135098
NCBI-ProteinID: NP_001122136
Xenbase: XB-GENE-976994
UniProt: B3DLX7
Position
6:complement(111459753..111482110)
AA seq 908 aa
MGLTVTSTGTSVLTWCLLLILPVVVFTDTCEKVKLYVPSVIYSGHLIGKVNLRHCLDSDA
LSIQSSNPDFLILEDGSIFAQKRISLAGKTWFTIRLLDSATLTEKKIRVKLITKTKTAKS
RYARELLRRSKRRWAPLPFSIDEGYIGPFPCFVQQIQSDTQENYTIKYSISGPGVTEEPI
GLFSIEPETGNIFYTRRVDREQYPVFKLIGFAKTLDGYSPEIPLNIIIKVEDTNDNPPIF
VEESFCIEVPEHTKQGVIIGRVKALDKDEPNTLHTTLRYSIISQTPPSPVMFALHPEAGI
ITTTSNRLDREIADSYVLIIECRDMPGQRSFLSSTGTVSITVTDVNDNAPTFVQKSYQVE
VNENESGMVILCIPITDSDLHDSPNWRAKYYITQGNEKGYFSISTDPKTNNGCIKVEKPL
NYEEAKRIQILVGVTNEVDVINFSGVKSSGMSTIPVIIIVKDVDEGPEFIPTVKEIRVRE
NTPIGTEIYTCQARDPETKSKEGIRFMKQLDMLNWVNVDATTCRITLARILDYETDQSLR
HQQNVTIIGVDQSGKTGTGTIIIHLEDVNDNYPNISRADTTICQNGRTYSLVMAEDRDGV
PNSAPFIFRIDSSNNPDLQNQFKVERINDTAIYIRADGVPDGDYQIPLIVTDQQGYGQTQ
IMRIKKCYCPDNINCAGFLDGKKGIFAALGGWAILVMVLSALLFALLLCGLCACLCGAAA
TKGKKSFPDDSAQQNLIVTNTEAPGADVMDSNFKIPVHVTNAHLSGNAPSVSGGKGQGGQ
SGSQVIQQTVHTRKSTGQLNTVEDNRGVYTLTSMGGGGGQQLFDANRVNYSDWHSFMHTQ
LDEKLYMCGQNEEQQHGDDYVLSYNFEGKGSAAGSVGCCSDFRDEDKMDFLNHLEPKFRT
LAEVCRKK
NT seq 2727 nt   +upstreamnt  +downstreamnt
atggggctgacagtgacatccacagggacttccgttcttacctggtgcctcttactgatt
ctgccggtagttgtatttacagacacctgtgagaaagtgaagctgtatgtaccttctgta
atctattctggacatctgattggcaaagtaaatctgcggcattgtctggattcagatgca
cttagtattcagtcaagcaatcctgatttcttgattttggaagatgggtccatttttgca
caaaaacgtatttcactggctgggaaaacatggtttacaattcgactcttggactctgcg
actttgactgagaaaaaaatccgagtgaaactgataaccaaaacaaagactgctaaatca
agatatgcaagagagctactgagacgttccaaacgaagatgggctcctctaccattttct
attgatgaaggctatattggaccattcccatgttttgtacaacagatccagtccgacaca
caggagaactatactatcaaatactctatatccggacctggtgtgaccgaagaaccaatt
ggcttgttttctatagaaccagagactggaaatatattttataccagaagagtagatcgt
gagcagtatccagttttcaaattaattggctttgcaaaaactttggatggctattcacca
gaaattcccttaaatataataatcaaagttgaagacaccaatgataatccacctatattt
gtagaagaatcattttgtattgaagttcctgaacacacaaaacaaggtgtaataatagga
agagtcaaggctttggacaaggatgaacccaataccctgcacactaccctaagatacagt
attatttcacagactcctccatcacctgtaatgtttgctcttcatccagaggctgggatt
atcactacaacctcaaacagacttgatagagagattgcagattcttacgtccttatcatt
gaatgtcgggatatgcctgggcagcgttcatttttgtcctcaactggaacagtatccatt
acagttacagatgttaatgacaatgcacccacttttgtacaaaagtcttaccaggtagaa
gttaatgaaaatgaaagcggaatggtcatcttatgcatacctataaccgacagtgacctg
cacgactctcccaactggagagctaagtattacatcactcagggaaatgagaaaggatat
ttcagcataagtacagatccaaaaaccaacaatggatgtattaaggttgaaaagccacta
aattacgaagaagcaaaaaggattcaaatactggtgggagtcacaaatgaggttgatgtt
ataaacttttcgggagtgaaaagttctggcatgagcaccatccctgttatcataattgtt
aaagacgttgatgaaggacctgagtttataccaactgtcaaagaaataagagttagagaa
aacacgccgatagggactgaaatatatacatgtcaagcaagagacccagaaacaaagagc
aaagaaggcatacggtttatgaaacagttagatatgctaaactgggtgaatgtcgatgca
acaacctgtcggataacactggccagaatcctggattatgaaaccgatcagtcactgaga
caccagcaaaatgtgactatcattggggtggatcagagtggcaagactggtactggcaca
attataatacatctggaagatgttaatgataactatccaaacatttcaagggctgacaca
actatttgccaaaatggcaggacctatagcctggttatggccgaagaccgagatggagtt
ccgaactctgcacctttcatattcagaattgattctagcaataaccctgacctacaaaat
cagtttaaagtagaaagaattaatgatacagccatttatataagagccgatggtgttcca
gatggagattaccaaattccgctaattgttacagatcagcaaggctacggccaaacacag
attatgaggattaagaagtgctattgcccagataatattaactgtgctggttttctggac
ggcaaaaaaggcatctttgctgctcttggtggatgggctattctagtgatggtgctgtct
gcattgctctttgctctgctcttatgtggtttgtgtgcttgcctctgtggcgctgctgct
acaaagggtaaaaagagttttcctgatgattcagcacaacaaaatctaattgtaaccaac
acagaggcaccaggagcagacgtgatggattcaaatttcaaaattcctgttcatgtaaca
aatgcccaccttagtggaaatgctccatctgtctcaggtggcaaaggacaagggggacaa
agtggaagccaggttatacaacaaactgtccatacaagaaaaagcacagggcaactaaac
actgtggaggataacaggggtgtctataccttaacttctatgggaggaggaggaggacaa
cagttgtttgatgcaaacagagttaactattcagattggcacagttttatgcacacccag
cttgatgaaaaattatacatgtgcggacagaatgaggagcaacaacatggcgatgattat
gttctgtcctacaattttgaaggaaaagggtctgcggcaggatctgttggatgctgcagt
gattttcgagatgaggacaaaatggactttttaaatcatttagagccaaagttcaggaca
ttagcagaagtttgtagaaaaaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (22)   

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