KEGG   Xenopus tropicalis (tropical clawed frog): 100135224
Entry
100135224         CDS       T01011                                 
Symbol
ercc1
Name
(RefSeq) DNA excision repair protein ERCC-1
  KO
K10849  DNA excision repair protein ERCC-1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03420  Nucleotide excision repair
xtr03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    100135224 (ercc1)
   03460 Fanconi anemia pathway
    100135224 (ercc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xtr03400]
    100135224 (ercc1)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     100135224 (ercc1)
SSDB
Motif
Pfam: Rad10 HHH_5 HHH_2 HHH HAO_bd HHH_3
Other DBs
NCBI-GeneID: 100135224
NCBI-ProteinID: NP_001107393
Xenbase: XB-GENE-5895462
UniProt: A9ULN8
Position
7:complement(59215811..59251065)
AA seq 268 aa
MEKKNYNSREGGPKIFLSKEPVSHPEETKSTVPKHQVSSVGVRENEVCIMEQAANQTTKS
VGVRSSIIVSTRQRGNSLLKYLRNVPWEFGNIIPDYVLGETCCALFLSLRYHNLNPEYIH
LRLRSLGQSFALRVLLVQVDVKDPHFSLKELAKICILSDCTLILSWSPEEAARYLETYKC
YEQKPADVLKERTEKDLMSRMAECLTTVKYVNKTDSCTLFTTFGTLFDLANASREDLSLC
PGLGPQKAKRLYDTFHEPFLKTSTMTFQ
NT seq 807 nt   +upstreamnt  +downstreamnt
atggaaaagaaaaattataactcgagagaagggggacccaaaatatttctatccaaggag
ccagtttctcatccggaggagacgaagagtactgtaccaaaacaccaagttagcagtgtg
ggtgtaagagaaaatgaagtttgcattatggagcaagcagcgaatcaaactacaaagtct
gtaggagtgagaagcagtattattgtcagcacccgacagcgaggaaactcactacttaaa
tatttgcgaaatgtgccatgggagttcggaaacattattcccgactatgtacttggggaa
acctgctgtgctctctttctgagtctgcgttaccataatctgaatccagagtacatacat
ttgcgtctgaggtcccttggtcaatcctttgcactacgtgtgcttcttgtacaagtggat
gtgaaagaccctcatttttctcttaaagagttggcaaagatctgtatcctttctgattgc
acactaatactaagctggagtcctgaggaggctgcccggtaccttgagacatacaaatgt
tatgagcagaagcctgcagatgtgctgaaagaaagaactgagaaggaccttatgtccaga
atggcagagtgtctcacaactgttaagtatgtaaacaagacagacagctgtactttattc
accacatttgggactttgtttgaccttgcaaatgcatcacgtgaagatctttctttatgc
cctggccttggacctcagaaagctaaaagactatatgacacatttcatgaaccattccta
aaaacaagcacaatgacatttcagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (12)   
   RefSeq(nuc) (4)   
   GenBank (4)   
   EMBL (4)   
Protein domain (6)   
   Pfam (6)   
All databases (33)   

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