KEGG   Xenopus tropicalis (tropical clawed frog): 100135747
Entry
100135747         CDS       T01011                                 
Symbol
ubtf
Name
(RefSeq) nucleolar transcription factor 1 isoform X1
  KO
K09273  upstream-binding transcription factor
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xtr03000]
    100135747 (ubtf)
   03021 Transcription machinery [BR:xtr03021]
    100135747 (ubtf)
Transcription factors [BR:xtr03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   UBF
    100135747 (ubtf)
Transcription machinery [BR:xtr03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    UBF
     100135747 (ubtf)
SSDB
Motif
Pfam: HMG_box_5 HMG_box HMG_box_2 DUF4473
Other DBs
NCBI-GeneID: 100135747
NCBI-ProteinID: XP_002935582
Xenbase: XB-GENE-966565
UniProt: A0A7D9NK92
Position
10:complement(18513025..18525841)
AA seq 700 aa
MNGAAGGVAKGNMTAPKDQDQWSQEDMLTLLQTMKSLLPSQDNSKFKTTESHLDWNKLAF
KNYSGSMCRQKWMEISNEVRKFRTLTELILDAEEHVKNPYKGKKLKKHPEFPKKPLTPYF
RFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQKEKLDFERNLAKFR
DEHPDLMQNPKKSDVPEKPKTPQQLWYNHERKIYLKLHADASTKDVKEALGKQWSQLSDK
KRLKWIHKALEQRKLYENIMREYMQKHPELNLTEEGITRSTLTKAERQLKDKFDGRPTKP
PPNSYSMYCAELMANMKDVPSTERMVLCSQRWKLLSQKEKDAYHKKCEQKKKEYEVELMR
FLENLPEEEQQRVLAEEKMVGIRKGTNTPASKMATQDAAKVKSRSSQADKKKAADERAKL
PETPKTAEEIWQQSVIGDYLARFKNDRAKALKCMEATWLNMEKKEKIMWIKKAAEDQKRY
ERELSDMRSAPTPTTAGKKVKFLGEPKKAPMNGYQKFSQELLSNGELNHLPLKERMVEIG
SRWHRISPAQKEYYKKLAEDQQRIYRTQFDAWMKTLSSQDRAAYKEQNSNKRKSTTKIQT
PSNKSKLVVQSKSEDDDDDDDDDDDDEDDEDDEDEDKEDSSEDGDSSESSSDEDSEDGEE
NEDEEDEEEDDEDDEEDDDNESGSSSSSSSSADSSDSDSN
NT seq 2103 nt   +upstreamnt  +downstreamnt
atgaacggagcagctggcggtgtagcaaaaggaaacatgacagccccaaaagatcaagac
caatggtcccaagaggatatgctgactctcctacaaaccatgaagtcactcctgcccagc
caggacaactctaagtttaagacaacagagtctcacctagactggaacaagctggctttc
aaaaattattctggttccatgtgtcgccagaagtggatggaaatttccaatgaggtcagg
aagttccggactcttactgagttgatcttggatgcagaggaacatgttaaaaatccatac
aaagggaaaaaactgaagaaacacccagaatttcccaagaagccgctcaccccttatttc
cgcttcttcatggaaaagagggctaaatatgcaaaactacatccagaaatgagtaatctg
gatctcaccaagattctgtccaaaaaatacaaagagttgccagagaaaaaaaagatgaaa
tacatccaggacttccagaaagaaaagctggactttgagaggaacctggctaaattcagg
gacgagcatcctgatctcatgcaaaatccaaagaaatctgatgtcccggaaaagcccaag
acccctcagcagctgtggtataaccatgagaggaagatctacctcaaactgcatgctgat
gccagcacaaaagacgtgaaggaagcattagggaagcagtggtcccagttatctgataag
aagcgcctgaaatggatccataaggcactggagcaacgcaagctatatgaaaacataatg
agggaatatatgcagaagcacccagaactgaacttaacagaagagggcattactcgctcc
actctcaccaaggccgagcgacaactgaaggacaagtttgatggccggccaaccaagcct
ccaccgaacagttactcaatgtactgcgcagaactgatggccaatatgaaggatgttccc
agcactgaacgcatggtcctctgcagccaaaggtggaagctgctctcccagaaggagaag
gacgcctaccacaagaagtgtgagcagaaaaagaaagaatatgaagtggagctgatgcgt
ttccttgagaatctcccagaggaggagcagcaaagggttctggcagaagaaaagatggtg
ggtatcagaaaaggaactaacaccccagcatcaaagatggccacccaggatgctgcaaag
gtaaagagcagatcctcacaggcagacaagaagaaagcagcagatgagagggctaaactg
ccggagacccccaaaaccgcagaagaaatctggcaacagagcgtgattggagactatctt
gctcgatttaagaatgaccgtgcgaaagccctgaagtgcatggaggccacatggttaaat
atggagaaaaaggaaaaaatcatgtggataaagaaggcagccgaggaccagaaacgctat
gagagagaactaagtgatatgcgttctgctccaactccaactacagctggaaagaaggtc
aagtttttgggagagcccaaaaaagcacccatgaatggctaccagaagttctctcaggag
ctcctgtccaacggagaactcaatcacctcccccttaaggaacgaatggtagaaattgga
agccgatggcacaggatttcccctgctcaaaaggagtattacaagaagctggcagaggac
caacagaggatctatcgtacacaatttgatgcctggatgaagactttatcgtcacaagac
cgtgctgcatacaaggaacagaattcaaataaacgcaaaagtacaacaaaaatacagact
cccagcaacaaatccaaattagtagttcagagcaaatcggaggatgatgatgacgatgac
gatgatgacgacgatgatgaggatgatgaagatgatgaagatgaagataaggaggactca
tctgaagatggagattcttcagagtctagcagtgatgaggacagtgaggatggtgaggag
aatgaagacgaagaagatgaggaggaggatgatgaggatgatgaagaggacgatgacaat
gaatcaggatccagctcttcttcctcttcttctgcagactcttctgactcggactctaac
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (11)   
   UniProt (1)   
   RefSeq(pep) (10)   
DNA sequence (16)   
   RefSeq(nuc) (10)   
   GenBank (3)   
   EMBL (3)   
Protein domain (4)   
   Pfam (4)   
All databases (40)   

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