KEGG   Xenopus tropicalis (tropical clawed frog): 100145160
Entry
100145160         CDS       T01011                                 
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein sorting factor-like
  KO
K25731  VPS35 endosomal protein-sorting factor-like
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    100145160 (vps35l)
Membrane trafficking [BR:xtr04131]
 Protein recycling
  Others
   Retriever complex
    100145160 (vps35l)
SSDB
Motif
Pfam: DUF5667
Other DBs
NCBI-GeneID: 100145160
NCBI-ProteinID: XP_012826281
Xenbase: XB-GENE-5857341
UniProt: F6W9V8
Position
9:31852895..31902541
AA seq 963 aa
MTQKMAAQWRSRERNYPEEFESWHLERVTVENEDYHPLKPIMVTESKTKKVGRKESTSSS
SSSCSSNSVADPLSSVLDGTDPLSLFAATAEPVASNVDGKRKKNENEEYVGSDFEPWSSK
RGEILARYTTTEKLSINLFMGSDRGKTTNAGSAVSEKVRTRLEELDDLEEGSQKELLNLT
QQDYISRIEELNQSLKDAWASDQKVKALKIVIQCSKLLSDTTVIQFYPSKFVLITDILDT
FGKLVYERISSMCLDSRSSLPENFSPETVNDTAKETCLNWFFKIASIRELVPRFYVEAAI
LKCNKFLSKTGISESLPRLTTMIRGIGDPLVAVYARAYLCRVGMEVAPNVKESLNRNFFD
FLLTFKLIHSDTVQNQLAVQAVEIPVYLTLYSPAIDWMLRCIAYRAPETLLTEMMERCKK
QGNNALLLNSVMSAFRADFIATRSMDFIGMIKECDEAGFPKHLLFRSLGLNLALADPPEN
DRLQILNEAWKVITKLRNPQDYINCSEVWVEYTCRHFTKREVNTILADIIKHMTPDRAFE
DAYQQLQSVITKVITHFQDFSVLFSVEKFLPFLDMFQKESVRVEVCKCIMEAFIRHQQEV
TKDPVILNALLHVCKTMHDSVNALTLEDEKRTLANLINGFIRMVSFGRDFEQQLSFYVET
RSMFCNLEPVLIQLIHSVNHLAMETKKVMKGNHSRKTASFVRACVAFSFITIPSLTSIFT
RLNLYLLSGQVALANQCLSQADAFFKAAVSLVPDVPKTISIDGKMRSSEPFLLEFLGNFF
STLLVVPDHPEQGVLFLVRGLLNVIEDYTWEDNSDDKVRIYTSVLHLLAALSQESYLLHV
DKVDSNDNLYGGDTKFLAEINRLCDTLIGQILEHLKTLGKEKTLKRQSYLALLFFNSILA
HGDLRNNKLNQLAVNLWNLAQRHGFADTKTMVKTLEYIKKKSKESEWSHFSDLAARLPLQ
SRT
NT seq 2892 nt   +upstreamnt  +downstreamnt
atgacacagaagatggctgcgcagtggcgttcgagggaaagaaattacccagaagaattt
gagtcttggcacctggagagagtgactgtggaaaatgaggactatcatccactgaaaccc
atcatggtgactgaatccaagaccaagaaggtggggcgaaaggaaagcacgtcctccagt
tcatcatcatgctcatctaattctgtggctgatcctctcagcagcgtattggatggcaca
gaccctctgtccttgtttgcagcaactgcagagccagtggcatcaaatgtggatggcaaa
agaaaaaaaaacgagaatgaagaatatgttggaagtgactttgagccttggtccagcaaa
cggggagaaatccttgccagatacacaacaacagagaaactttccattaatctcttcatg
ggctctgacagaggcaaaaccacaaatgcaggctctgctgtttcagaaaaagtgagaacg
cgacttgaggaactcgatgaccttgaagagggatcacagaaagaacttttgaatttgacc
cagcaagattacattagtcgcattgaggagctaaaccaatcacttaaggatgcctgggca
tcagatcagaaagtcaaggctctgaagattgttatacagtgctctaaacttctctcagac
acaacagtgatccagttttacccaagcaaatttgtgttaattactgatatcctggacact
tttggaaaacttgtgtatgaacgcatctcctcaatgtgcttggatagccgatcttcatta
cctgaaaatttttccccagaaactgtaaatgacactgccaaagagacctgtctaaactgg
ttctttaagatagcatccatcagagaacttgttccaagattctacgtggaggcagcaata
ttgaagtgcaacaaatttctctctaaaacagggatatctgagagtcttccccgtttgaca
actatgatcagaggcataggtgacccactagtggcagtgtatgctagagcgtatctctgc
agggttggaatggaagttgctcctaatgtgaaagaaagtctgaaccggaacttttttgac
tttttacttacatttaaactaattcacagtgacacagtgcagaatcagctggcggttcag
gctgtagagattccagtttacctcacactgtactctcctgctattgactggatgttacgg
tgcattgcatatcgtgctccagagacgctgttaacagaaatgatggaacgctgcaagaag
caagggaacaatgccttgctgctgaattcagtaatgtctgctttcagagcagactttatt
gcaaccagatcaatggactttattggcatgattaaagaatgtgacgaggctggctttcct
aagcatcttctatttcgctcacttggattaaacctggctttggctgaccctcctgagaat
gacagacttcagattttaaacgaagcttggaaagtgatcaccaagttaagaaacccacag
gattacattaactgctcagaggtttgggttgaatatacatgcaggcattttacgaagcgg
gaggtgaatactatacttgcagatataataaagcacatgactcctgatcgtgcatttgag
gatgcatatcaacagttacagtcagtcataacaaaggttattactcatttccaagacttt
tctgtcctgttctctgtggagaagttccttccatttttggatatgtttcagaaagaaagt
gttagagtggaggtttgcaagtgcatcatggaagctttcatccggcatcagcaggaagtg
acaaaagatccagtcattctcaatgctcttcttcatgtatgcaagacaatgcacgactct
gtgaatgctctgacccttgaagatgaaaagaggacattggctaatctgataaatgggttt
atacgaatggtctcctttggacgggactttgaacaacagctgagtttttacgttgaaacc
agatcaatgttttgtaatctagagcctgtgcttatccagttaattcatagtgtgaaccat
cttgccatggagacaaaaaaggtgatgaaaggaaatcattcaaggaagactgcctcattt
gtcagggcttgcgttgccttctcctttataaccatcccatctctgactagcatcttcaca
cggctcaatctgtacctgctttcaggccaggtggccctggcaaaccagtgcctttcacaa
gcggatgccttttttaaagctgcagtaagccttgttcccgatgtcccaaagaccatcagt
atagatgggaagatgcggtcctctgaaccctttctcttggagtttcttggcaatttcttc
tccacattacttgttgttcctgatcacccagaacaaggagttctctttctagtacggggt
cttctaaatgtcatagaggattatacatgggaagataacagtgatgataaagtgcggatt
tacaccagtgttttacatctccttgctgcattaagccaagaaagctatttgcttcatgtg
gacaaagttgactctaatgataatctttatggaggagacaccaagttcctggcggaaatt
aaccgactttgtgatacgcttataggacaaattttggaacatctaaagacccttgggaaa
gaaaagaccctgaaacgtcagagttatttagccttgctgtttttcaacagcattcttgct
catggagatctaaggaataataaactcaatcagctggctgttaacctatggaatttggct
caaaggcatggctttgcagacaccaaaactatggtgaagaccttagaatacatcaagaaa
aaaagcaaagagtctgaatggagtcatttcagtgaccttgcagcaagactacctttacaa
tccagaacctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (29)   

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