KEGG   Xenopus tropicalis (tropical clawed frog): 100145610
Entry
100145610         CDS       T01011                                 
Symbol
use1
Name
(RefSeq) vesicle transport protein USE1
  KO
K08507  unconventional SNARE in the endoplasmic reticulum protein 1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    100145610 (use1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    100145610 (use1)
Membrane trafficking [BR:xtr04131]
 SNARE
  SNAP-25[C] (Qc)
   Use1
    100145610 (use1)
SSDB
Motif
Pfam: Use1 MCU EssA AAR2 Cauli_AT Carbpep_Y_N Dfp1_Him1_M
Other DBs
NCBI-GeneID: 100145610
NCBI-ProteinID: NP_001120491
Xenbase: XB-GENE-972033
UniProt: B1H3E7
Position
1:complement(111880424..111906590)
AA seq 259 aa
MAKSRLEINFVRLLSRCEAMASEKREEGEWRLEKFVCALEEMLDSIKKDNRKPAAELLVE
YSRKVDFLKGLLEAEKLPSPSEKALANQFLAPGRTPTISKERTPVTKTVHLQTQARYTGE
MRNELLGKGTLAANDFGDVYPRKRKGSVSDDKQSAAELDAVLQHHHNLQEKLAEEMLRLT
QNLKNNTLAAQNVIKQDNQTLSHSIKLADQNFEKLKTESDRLEQHAKKSVNWILWIMLIF
VCFTFISMILFIRIFPRLR
NT seq 780 nt   +upstreamnt  +downstreamnt
atggcgaagtctaggctggaaattaattttgttcgtttactgtctcggtgtgaggctatg
gcttccgaaaagagggaggagggggagtggaggctggagaagtttgtctgtgccttggaa
gaaatgcttgattcaataaagaaagacaacagaaagcctgctgcagaacttctagttgaa
tattctcgaaaggtggacttcttaaaagggctgttagaagctgaaaaactgccctctcca
agtgagaaagctctggccaatcagtttcttgctccaggccgcacacccactataagcaag
gagcgaacaccagtcaccaagacagtgcatctgcaaacccaagcacgctatacaggggag
atgagaaatgagttgttgggaaagggcactctagctgccaatgattttggcgatgtttat
ccaagaaaaaggaaaggctctgtttcagatgacaagcaatctgcggctgagcttgatgca
gtgctacagcatcatcataatctacaagagaaactggccgaggaaatgctacgtctcacc
caaaacctaaagaacaacacactggcagcgcagaatgttattaaacaggataaccagaca
ctgtctcattctatcaagttggctgaccagaactttgaaaagctaaagacagaatcagac
cgcctggagcagcatgccaagaagtctgtcaactggattctctggattatgctcatcttt
gtctgcttcacttttattagcatgattctttttatcagaatatttcccaggttgcggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (21)   

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