KEGG   Xenopus tropicalis (tropical clawed frog): 100145674
Entry
100145674         CDS       T01011                                 
Symbol
sde2
Name
(RefSeq) replication stress response regulator SDE2
  KO
K25059  replication stress response regulator SDE2
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xtr03041]
    100145674 (sde2)
   03032 DNA replication proteins [BR:xtr03032]
    100145674 (sde2)
   03400 DNA repair and recombination proteins [BR:xtr03400]
    100145674 (sde2)
Spliceosome [BR:xtr03041]
 Complex C
  Other components
   Complex C specific factors
    100145674 (sde2)
DNA replication proteins [BR:xtr03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    100145674 (sde2)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    100145674 (sde2)
SSDB
Motif
Pfam: SDE2_2C Sde2_N_Ubi GvpG
Other DBs
NCBI-GeneID: 100145674
NCBI-ProteinID: NP_001120528
Xenbase: XB-GENE-5807809
UniProt: Q07G43
Position
5:8229538..8235664
AA seq 468 aa
MASVWVRDALSSRLQLVRVAPGAAALDLLSQAGTAIPLTDFYITCNGHLADLEEKLQDGR
TYSIVPRLCGGKGGFGSMLRALGAQIEKTTNREACRDLSGRRLRDVNHEKAMAEWIKKQA
DREAEKEQRRLERLQRKLAEPKHYFTDPEYHKQCHDMSERLEEAVIKGLQASSSSMASAE
SDDTRKRKKDMYSSKGTPGKKKCFWTGLEGLETSSSSDSASDSDLDESPCSSSSSSSDSK
YYENIKERLQSPESQSSPEELGQGSSDGSHQMLEGHSSSDRSHQMLEGQASCSGSDQMLE
GPSSSAGAQWQSSSKGTELVQESQSIPVESEQNMESQNSSDESKQTAFNNSGINVECENV
TSPGSTGQDGQTPNDGVRPASPSIPISKQELQQPSNAETSPIDLLAFKTAAELEALGLEK
LKLELGALALKCGGTLQERAARLFSVRGLPRDQIDPSLFAKPAKGKKK
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggcgtccgtgtgggtgagagatgcgcttagtagcaggttgcagttggtcagagtggct
ccgggggccgcggcattggatctgctctcacaggcaggaaccgcaataccactgactgac
ttttatatcacgtgtaatgggcacctggcagaccttgaagagaagctgcaggatggacgc
acctacagcattgtacctcgactgtgtgggggtaaagggggctttggttctatgctcagg
gcacttggtgctcagattgaaaagaccacaaaccgcgaggcttgtcgtgatctcagtggg
aggcgacttcgagacgtgaaccacgagaaagcgatggcagaatggataaagaaacaggca
gatcgggaagcagagaaagagcagcgacgcctggagaggctacagcgtaaactggcagag
ccaaagcattacttcactgacccagaataccacaaacagtgccacgacatgtccgagaga
cttgaagaagcagtaattaaagggttacaggcatcctccagcagcatggcttctgcagag
tccgatgatacccggaaacggaagaaggacatgtactctagcaaagggacacctggcaaa
aagaaatgcttttggacgggattggaagggttagaaacctcttcaagctctgattctgcc
agtgacagtgatcttgatgaatctccttgctcatcatcttcgtcatcatcagattctaaa
tactatgagaacattaaagagagactacaaagccctgaatctcagagcagcccagaggaa
ctggggcaaggcagttctgatggatcacaccaaatgctagaggggcattccagttctgat
agatcacaccaaatgctggagggtcaagccagttgcagtggttcagaccaaatgctagag
gggccttcaagttctgctggagcgcagtggcaatccagttctaaaggcactgaacttgtt
caggagtcgcaatccattccggtagaatcggaacaaaatatggagtctcaaaacagctca
gatgaatcaaaacaaaccgctttcaacaacagtggaatcaatgttgaatgtgagaatgta
accagcccaggcagtactggacaggacggacagactcctaatgatggggtgagacctgca
tctcccagtatccctatatccaaacaggaacttcagcagccatcaaacgccgaaacgtcg
cctatagacctcctggcctttaagactgcggcggagctggaagccctgggattggagaag
ctgaaactggagctgggggctcttgccctaaaatgtggcggaaccctgcaagagcgggcg
gcaaggctgttttctgtgcgcggacttcccagagaccagattgacccatcgctgtttgcc
aaacctgccaaaggaaagaagaaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system