KEGG   Xenopus tropicalis (tropical clawed frog): 100158514
Entry
100158514         CDS       T01011                                 
Symbol
syn1
Name
(RefSeq) synapsin-1
  KO
K19941  synapsin
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    100158514 (syn1)
Membrane trafficking [BR:xtr04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    100158514 (syn1)
SSDB
Motif
Pfam: Synapsin_C Synapsin Synapsin_N
Other DBs
NCBI-GeneID: 100158514
NCBI-ProteinID: NP_001121423
Xenbase: XB-GENE-6449731
UniProt: B2GU67
Position
8:1418767..1477308
AA seq 656 aa
MMNYLRRRLSDSNFMANLPNGYMSDLQRPDPPAPPPPGPQGPPPPPAVSPEPPSSGGFFS
SLSNAVKQTTAALSEQVSTATGGGPGPKGSKLLLVIDEPHTDWGKLFKGRRINGEYDIKV
EQAEFCDLNLVAHSNGGFSVDLEVMRNGVKVVRSLKPDFVLIRQHAFSMARNGDFRSLVI
GLQYAGVPSLNSLHSVYNFCDKPWVFSQLVRLHRKLGPDDFPLIEQTYYPNHKEMLTASK
FPVVIKMGHAHSGMGKVKVDNQYDFQDIASVVALTKTYATSEPFIDAKYDVRIQKIGSNY
KAYMRTSISGNWKTNTGSAMLEQIAVSDRYKLWVDACADIFGGLDICAVEALHGKDGRDH
IIEVVGSSMPLIGDQQEEDKQLIADLVVTRMSQNLQCSPSLSRPTHGPQPQAQVVHSRSA
TPIQQQQQPQRPPPQGGPQAAQVPARQGPPPQQRPPPQGQQVQGLSPQPSSHPQNLPSPG
AQQRQIPPQQQPQQVRPPQQPSPRQSQSPQRQPSPQGPQSPQRQQQGPPMPTGPKPMGVQ
PGQPRQSGPPRQAVPVGPQQKPAPPGSQQPPQQGIRQPMQQQQPPLQQRQSVPGAPQQQQ
QPQRPMTQQPRPNPQGPGQASSRPGGPQKPQVAQKPGAELPPPQPQLKHGGSALQP
NT seq 1971 nt   +upstreamnt  +downstreamnt
atgatgaattacctacggcgacgcctgtcggacagtaacttcatggccaacctgcccaat
ggctacatgagcgatttgcagcgaccggacccgcccgcccctccccccccgggcccccag
gggcccccaccgccccccgccgtgtcccccgaaccccccagctccgggggcttcttctcc
tccctctctaacgccgtcaaacagaccactgcggccctcagcgagcaggtatccaccgcc
accggggggggcccggggcccaagggcagcaagctgctcctagtcattgatgagccccac
accgactgggggaaactatttaaggggaggagaatcaatggagaatatgatatcaaagtg
gaacaggcggagttctgtgacctgaatctggttgcgcacagtaatggcggcttctctgtc
gacctggaggttatgaggaatggggtgaaggttgtgaggtcactcaagccggactttgtg
ctgattcgccagcacgccttcagcatggcacgtaatggcgacttccgcagcctggtgatt
ggcctgcagtacgcgggggtgcccagcctcaactccctgcactccgtctataacttctgt
gataaaccttgggtgttctcccagttggtgcggttacacaggaagttggggccggacgac
ttccctctcatagaacagacttattaccccaaccataaggagatgctgactgcgtccaaa
ttccccgtcgtgatcaaaatggggcacgcgcactcgggaatggggaaggtgaaggtggac
aatcagtacgatttccaggacatagcgagcgtcgttgcgctgaccaagacttacgccacc
tcagagccgttcatagacgccaagtacgacgtgcgcatccagaagatcgggtccaactac
aaagcctacatgaggacctccatctctggcaactggaagaccaacactgggtcggccatg
ctggagcagattgccgtgtcggacaggtacaaactgtgggtcgacgcttgtgctgacatt
ttcgggggtctcgatatctgcgcggtagaagctcttcatgggaaggacggacgggaccat
atcattgaggtggtcggctcctcgatgcctctgattggagaccaacaggaggaggacaag
cagctcattgcagatttggttgtgacccggatgtcccagaacctgcagtgcagcccatcc
ctgagtcgccctacgcacggcccccagcctcaggcgcaggttgttcactcaagatccgca
actcccattcagcagcagcaacagccccagagacccccacctcaagggggccctcaagca
gcccaagttcctgcgcgtcaggggccacctccccagcaacggcccccaccacagggtcaa
caggtccaaggtctaagtcctcaaccatcttcacatccacaaaatctacccagtccaggg
gcccagcaacgccaaattccccctcagcagcagccccagcaggtccggcccccccagcag
ccttcaccccgccaatcccaatccccccaaaggcagccaagtccccaggggccacagtca
cctcaaaggcaacagcaaggtccacctatgccaactggcccaaagccaatgggagttcaa
cctggtcaaccccggcaatctggtcctccaagacaggccgtgcccgtaggacctcagcag
aagccggcgcccccaggcagccaacagccgcctcagcagggcatccgccaaccaatgcag
cagcagcagccgcctcttcagcagcgccagtccgttcctggggcaccgcaacagcagcag
cagccacagcggccaatgactcagcagccccgacctaacccccaaggacccggccaagct
tcctcccgtcccggagggccacaaaagcctcaagtggctcagaagccgggcgccgagctg
cccccaccccagccgcagctgaaacatggcggctccgcgctccaaccttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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