KEGG   Xenopus tropicalis (tropical clawed frog): 100158518
Entry
100158518         CDS       T01011                                 
Symbol
sfpq
Name
(RefSeq) splicing factor, proline- and glutamine-rich
  KO
K13219  splicing factor, proline- and glutamine-rich
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xtr01009]
    100158518 (sfpq)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xtr03021]
    100158518 (sfpq)
   03041 Spliceosome [BR:xtr03041]
    100158518 (sfpq)
Protein phosphatases and associated proteins [BR:xtr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100158518 (sfpq)
Transcription machinery [BR:xtr03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     100158518 (sfpq)
Spliceosome [BR:xtr03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    100158518 (sfpq)
SSDB
Motif
Pfam: RRM_1 NOPS RRM_7
Other DBs
NCBI-GeneID: 100158518
NCBI-ProteinID: NP_001121427
Xenbase: XB-GENE-5968416
UniProt: B2GU75
Position
2:82237588..82274643
AA seq 659 aa
MPRDRFRNRGGGGGGMSIYRRGNGGRGGGMPNYRGSGYMDSNRGPHQNQQQGPPQQKQQQ
DKQPAQQQQKQTPAPEQKPAQQPQAATKPQDSQAPQPPAQSPQSKPAPSPQQKPGTTPQQ
QQSQPQSSPAKPVPQTPPQQLQKPPQQPQQQKPAPPNNASSQAKPGQPPVHHHQQQQQRS
RPGMNQVGQKRPHQSRFQSQPPPHAMESDAAEEKSSADDVSGWSDGVRATLSLLKRPGEK
TYTQRCRLFVGNLPTDINDDEFKKLFEKYGEPGEVFINKSKGFGFIKLETRALAEIAKAE
LDDLPMRGRQLRVRFATHSAALSVRNLSPFVSNELLEEAFSQFGPVERAVVIVDDRGRST
GKGIVEFAAKPAARKALERCTDGVFLLTTTPMPVIVEPLEQFDDEDGLPEKLAQKNHLYQ
KEREVPPRFAQHGTFEFEYSQRWKSLDEMEKQQRAQVEKNMKEAKEKLESEMEDAYHEHQ
ANLLRQDLMRRQEELRRMEELHNQEMQKRKEMQLRQEEERRRREEEMLLRQREMEEQMRR
QREEGYRMSYMDPRERDMRMGASQMSMADPYGAASQKYPPLGGAGMGYENSPGVAQATIS
SSIMGGDMRNERFVQGNAGTPNAQASRGIGTVPPTAAAGAGGYGRGREEYEGPNKKPRF
NT seq 1980 nt   +upstreamnt  +downstreamnt
atgccccgcgatcgatttaggaaccgcggtggtggaggaggtggaatgagtatctatcgt
cgcggaaacggtggccgcggaggagggatgccaaattaccggggatcgggatacatggat
tctaaccggggcccccatcaaaatcagcagcagggtcctccgcagcaaaaacagcaacaa
gacaagcagcccgcccaacagcagcaaaaacagactcctgctccagagcagaaacccgca
caacagccacaggctgcaaccaagccccaggattcccaggctcctcagcccccggcccag
tccccacagtccaagcccgccccgtccccacagcagaaaccgggcaccactccccagcag
caacaaagccaacctcagtccagccctgctaaaccagtgccccagacaccgccccagcaa
ctacagaagccgccccagcagccacagcagcagaaacccgcgcctcctaataatgcttct
tcacaggccaaacctgggcaaccccctgtccaccatcaccaacagcagcagcagaggtct
aggcctggaatgaaccaagtcggacaaaagaggccgcatcagtcccgcttccagtctcag
cccccgccccatgccatggagtcggatgccgctgaggagaaatcaagcgcagacgatgtc
tccggatggagcgatggtgtaagggctacactttcacttctgaaaaggccaggagagaag
acctacactcagcgctgcaggctgtttgttggcaatctcccaactgatataaacgacgat
gaatttaagaaactgtttgaaaaatatggggagccaggggaggtgttcattaacaaaagt
aaaggcttcggctttattaaactggaaactagagcattagcagaaatagctaaagcagag
cttgatgacttaccaatgcgaggaaggcaactacgtgtgcggtttgcaacacattcagct
gcactctctgttcgcaatctatctccatttgtttctaatgagctactggaagaagccttt
agtcagtttggaccagtggagcgagctgtagttatcgtggatgatcgagggaggtcaacg
ggaaaaggaatagttgagtttgcagcaaaaccagcagccagaaaggcacttgaaagatgc
actgatggagtttttcttctgaccactaccccaatgccagttattgttgagccccttgaa
caatttgatgatgaagatgggctgcctgagaaacttgcacagaagaatcacctttaccaa
aaggagagagaggttccaccaagatttgcccaacatggaacttttgagtttgagtattct
cagaggtggaaatctttggatgagatggagaaacagcaaagggcacaggtagagaaaaac
atgaaagaggcaaaagaaaagcttgaaagtgagatggaagatgcatatcatgagcatcaa
gctaatctcttgcgtcaagatttaatgaggcgtcaagaagaactcaggcgcatggaagag
cttcacaatcaagaaatgcagaagcgcaaagaaatgcaacttaggcaagaggaggaacgg
cgcaggagagaggaagaaatgttgctccgccagagagaaatggaagaacagatgaggcgc
cagagagaagagggttatcgtatgagttacatggacccacgggaacgagatatgcgcatg
ggagcaagtcagatgtccatggcagatccctatggtgctgcaagccaaaagtatccaccg
cttggaggagctggtatgggctatgaaaacagccctggggtagcacaagctaccatcagc
tcatcaattatgggaggagacatgcgcaatgagcgctttgtccaggggaatgcagggact
cctaatgcccaagcttccagagggattggaactgtgccacctactgcagctgcaggggct
ggaggctatgggagggggagggaagaatatgaagggccaaacaaaaagcccaggttctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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