KEGG   Xenopus tropicalis (tropical clawed frog): 100158536
Entry
100158536         CDS       T01011                                 
Symbol
ap1b1
Name
(RefSeq) AP-1 complex subunit beta-1
  KO
K12392  AP-1 complex subunit beta-1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04142  Lysosome
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    100158536 (ap1b1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    100158536 (ap1b1)
Membrane trafficking [BR:xtr04131]
 Endosome - Golgi transport
  Others
   AP-1 complex
    100158536 (ap1b1)
SSDB
Motif
Pfam: Adaptin_N Cnd1 B2-adapt-app_C HEAT_2 Alpha_adaptinC2 HEAT Cnd3 PDS5 Arm HEAT_EZ RTP1_C1 XMAP215_CLASP_TOG Maestro_HEAT Arm_2 FANCI_S3 API5
Other DBs
NCBI-GeneID: 100158536
NCBI-ProteinID: NP_001121444
Xenbase: XB-GENE-984900
UniProt: B2GUA2
Position
1:144870385..144892928
AA seq 946 aa
MTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQT
DNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITE
YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVANA
VAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQIFILDCLANYIPKDDREAQSV
CERVTPRLSHANAAVVLSAVKVLMKFMELLSKDLDYYGTLLKKLAPPLVTLLSAEPELQY
VALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASPANIAQVLAELKE
YATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIKDIFRK
YPNKYESVISTLCENLDSLDEPEARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQV
QLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVAAKEV
VLAEKPLISEETDLIEPTLLDELICYIGTLASVYHKPPNAFVEGSRGVVPKRLPPRTGSS
ESAESPEAAPAGVPTETHPSVIPSQGDLLGDLLNLDLAPPITGPPLTTSSVPLGGVDLLG
GGLDSLLGGDASTGLGLPTGFMAPPVAANPLGQSLGGGLGDLFDLGGGTGGVPGPYVAPK
AVWLHAMKGKGLEISGTFARRSGTVFMDLVFTNRALQVMSDFAIQFNRNSFGLAPAAPLQ
ILTPLAPNQSTEVSLPINTIGSVMKMEPLNNLQVAVKNNIDVFYFSILYPLHILFIEDGK
MERQMFLATWKDIANENEAQFQIRDCPTGSDAVSNKLQASNIFTVARRTVEGQDMLYQSM
KLTNGIWVLAEVRMQPGSPNCTLSLKCCAPEVSQFVFQAYETVVKN
NT seq 2841 nt   +upstreamnt  +downstreamnt
atgacggactctaaatacttcaccaccaccaagaaaggtgagatctttgagctaaaagca
gaactgaacagtgacaagaaagaaaagaagaaagaagctgtgaagaaggttatagcctcc
atgacagtagggaaagatgtcagtgccctgttcccagatgtggtgaactgtatgcagaca
gataacctggagctgaagaagttggtatacctttatctgatgaactatgccaaaagccag
ccagacatggccatcatggctgtgaacacattcgttaaggactgtgaagatccaaatcct
cttatccgtgccctagcagtacgtacaatgggctgtattcgggtggacaagatcacagaa
tacctgtgtgagccacttcgcaagtgtctgaaagatgaggatccgtatgtacgcaagact
gctgctgtgtgtgtagcaaaactacatgacatcaatgctcagctagtggaagaccaggga
ttccttgacaccttaaaagatttaatatctgactcaaaccccatggttgtggctaatgct
gtggcagctttgtctgagattgctgaatcacatccaagcagcaatctgctagacctaaac
cctcagtcaataaacaagcttcttacagctctaaatgagtgcacagaatggggccaaata
tttatcctggactgtctggccaactatatcccaaaagatgaccgtgaagcacagagtgta
tgtgaacgtgttactccacggctctcccatgcaaacgcagctgtggttctgtctgcagtg
aaagtcctaatgaagttcatggaactgctgtcaaaagacttagactattatggtacactc
ctgaagaagctagctccacccctggtaactctactttctgcagagcctgagctgcagtat
gtggcattacgcaacatcaacttaatagtccagaaacggcctgagatccttaaacatgaa
atgaaagttttctttgtaaaatacaatgacccaatatatgtgaaattagaaaaattagac
atcatgattcgcctggcatcaccagcaaacatcgcacaggttcttgctgagctgaaggaa
tatgccacagaagtggatgttgactttgtgcgcaaagctgtaagagcaatcggacgttgt
gccatcaaggtggagcaatctgcagagcgctgcgttagcaccttgcttgatctcatccaa
accaaagtcaattatgtagttcaggaagccatcgtggtgataaaggacatattcaggaag
tatccaaacaagtatgaaagtgtcatatcaactttatgtgagaacctggactctctggat
gagccggaggctcgggctgcaatgatttggattgtgggggaatatgcagaacgcatagac
aatgcagacgagctactagagagcttcctggagggattccatgatgagagcacacaggtc
cagttacaacttctaacagcaattgtgaagcttttcttgaaaaaaccaactgagacccag
gaactggtgcaacaagtattgagtttagcaacacaggattcagataatccagatcttcgg
gatcgtggctacatctattggaggctcctgtccactgacccagttgctgctaaagaagtt
gtcttagcagagaagccattgatttctgaagagactgacctaattgagcccactttgcta
gatgagcttatatgttacattggaacattggcttctgtctaccacaagcctcctaatgcc
tttgtggagggaagcagaggggttgtgcctaagaggctcccgccacgcactggctcgagc
gagagtgcagaaagtccagaggcagcacccgcaggtgttcccacagagactcacccctct
gtcattccatcacaaggagaccttctgggggatctccttaacttggatctagctccaccc
attactgggcctccacttactacaagttctgttcccttaggaggtgtggacttgcttggt
ggaggattagatagtttgctgggcggagacgcaagcactggtttggggcttcctacagga
ttcatggctccccctgtggctgcaaatcctcttggccaatctcttggcggaggtctggga
gatctttttgatctaggtggtggaacaggtggggtccctggaccttatgtggctccaaaa
gcagtatggttgcatgctatgaaagggaaaggcctggaaattagtggtacctttgctcga
agatctggaacagtattcatggacctggttttcaccaatcgagcactccaggtcatgagt
gactttgctattcagttcaatcgcaatagttttgggctggcacctgctgctcctctccag
atactcacacccttggcaccaaaccagtctactgaagtgtctcttccgataaacacaatt
ggctctgtcatgaaaatggaacctcttaacaaccttcaggttgctgtaaagaacaatata
gatgtattttacttcagtatcttgtaccctctacacatacttttcatagaagatggaaag
atggagcgacagatgtttttggccacgtggaaggatatagcaaatgagaatgaggcacag
tttcaaataagagactgccctacaggttcagatgcagtaagcaacaagctgcaggctagc
aatatcttcacggtggcccgaagaacagttgaaggtcaagatatgctttaccaatcaatg
aagcttaccaatggcatctgggttttagcagaagtgagaatgcaacctggtagccccaac
tgcacactgtctctaaagtgctgtgcacccgaagtatcccagttcgtcttccaagcttac
gagactgttgtgaagaactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (16)   
   Pfam (16)   
All databases (34)   

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