KEGG   Xenopus tropicalis (tropical clawed frog): 100170470
Entry
100170470         CDS       T01011                                 
Symbol
lefty
Name
(RefSeq) left-right determination factor precursor
  KO
K04668  left-right determination factor
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    100170470 (lefty)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:xtr04052]
    100170470 (lefty)
Cytokines and neuropeptides [BR:xtr04052]
 Cytokines
  Transforming growth factors (RSTK binding)
   100170470 (lefty)
SSDB
Motif
Pfam: TGFb_propeptide TGF_beta
Other DBs
NCBI-GeneID: 100170470
NCBI-ProteinID: NP_001123725
Xenbase: XB-GENE-6258963
UniProt: B3DLA0
Position
5:8257815..8261548
AA seq 365 aa
MGVTSTCLCLILSTLCLAASSAFSPDHIRDALLRKLNLQEPPKLEKRDVEKLLIPRHIQA
KYMSMLHTHRERKRRSLPSLAGILRGISGNADIAGEIVYSDSSKQTLVFGMESRIPENSE
VTMAELKLFKKPPQIMNVPERRFHRPVNNARVSVYYVEMLTDGTNRTSLVDSRLVPIMES
GWRSFDVTQAVQYWTRSGGQSPMHLEIRVDGERHGSHASEMAKLVRFTTQSASDNSLGKP
ELVLYTLNLDEHGARGDCSASGAQKDHICCREEHFINFRELTWTQYWIIEPAGYNAFHCT
GSCKQPKFPLSHYHYGQRTCAVVESAPLPVMYLVKKGDYTEIEVAEFPNMIVEKCGCTMD
NIAII
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgggtgtcactagcacatgtctctgcctgatcctcagcaccctgtgcctggctgccagc
agcgccttcagccccgaccatatccgagatgctctgctcagaaaactcaacctccaggag
ccccccaagctggagaaaagggacgtggagaagctgctgatccccaggcacatccaagcc
aagtacatgtctatgcttcatactcacagggagaggaagaggagatccctgcccagcttg
gctggcatcctcaggggcatctctggcaacgcagatattgccggggagattgtgtattca
gactccagcaagcaaaccttggtgtttggaatggagtcccgaatcccagagaacagtgag
gtgactatggctgaactcaagctcttcaagaaacccccccaaatcatgaacgtcccagag
aggagattccaccgaccggtcaataacgccagagtcagtgtgtactatgtggagatgctc
acagatgggaccaacagaacctccctggtggactctaggcttgtgcccatcatggagtcg
ggctggaggagctttgacgtgacccaggctgtgcagtactggacaaggagcggggggcag
tcaccgatgcacttagagatccgggtggatggggagcgacatggaagtcatgcgtctgag
atggcaaagttggttcgtttcaccacccagagcgcttcggataactctctggggaaacca
gaacttgttctatacacactcaacctggatgagcatggggcccgcggcgactgctcggca
tcaggtgcccaaaaagaccacatctgctgcagggaggaacatttcattaacttccgggag
cttacctggacacagtactggattatagaaccggcgggatacaacgcgtttcactgcaca
ggaagttgcaagcaacccaagttccccttgtcccattatcactatgggcagcgaacgtgc
gctgtggtggaaagcgccccgctgcccgtcatgtacctggtcaaaaagggcgactacacg
gaaatcgaagtggcggaattccccaatatgatagttgaaaaatgcggttgcaccatggac
aatatcgctatcatatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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