KEGG   Xenopus tropicalis (tropical clawed frog): 100170586
Entry
100170586         CDS       T01011                                 
Symbol
khsrp
Name
(RefSeq) far upstream element-binding protein 2
  KO
K13210  far upstream element-binding protein
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xtr03019]
    100170586 (khsrp)
   03041 Spliceosome [BR:xtr03041]
    100170586 (khsrp)
Messenger RNA biogenesis [BR:xtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     100170586 (khsrp)
Spliceosome [BR:xtr03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    100170586 (khsrp)
SSDB
Motif
Pfam: KH_1 KH_2 DUF1897 KhpA-B_KH
Other DBs
NCBI-GeneID: 100170586
NCBI-ProteinID: NP_001123831
Xenbase: XB-GENE-493317
UniProt: A0A6I8RHA5 B3DM06
Position
3:complement(141251326..141269618)
AA seq 675 aa
MSEYPGAQTGNRKDAFADAVQRARQIAAKIGGEATGGVNNTPEFNFGGQKRQLEDGDVFG
FPSPDQPECKKLATQPEPIPPPLAPVHPPRSSSMTEEYRVPDGMVGLIIGRGGEQINKIQ
QESGCKVQISPDSGGMPERVVSLTGSPDSVQKAKMLLDDIVARGRGGPPSQFHDNSNGQN
GSLQEIMIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDGSQNTNMDKPLRIVGEPFKV
QQACEMVMDLLRERDQANFDRNEYGSRGGGGGGGGGIDVPVPRHSVGVVIGRNGDMIKKI
QNDAGVRIQFKQDDGTGPDKIAHIMGPPDRCEHAARIISDLLQSLKTGPPGPPGPGMPPG
GRGRGRGQGPWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQPPPNGD
PNFKMFTIRGNPQQIDHAKQLIEEKIEGPLCPIGPGPPGPGPSGPMGPYNPGPYQPGPPG
APPHQGPPPPPPPHQYPPQGWGSTYPQWGQPPAPHDPTKPPAPTDPSAAWAAYYSHYYQQ
PPAPVPGQPPAVPVPPPQGEPPQQPPPASQPDYTKAWEEYYKKMGQQTPQPAGQPDYTKA
WEEYYKKQAAAQAAATPGAPAAAAAAAATAAPPAAQPDYSAAWAEYYRQQAAYYGQAPGA
PPTQPPPAQPGPQAQ
NT seq 2028 nt   +upstreamnt  +downstreamnt
atgtcagagtatcccggagcccagaccgggaaccgcaaggatgcgtttgccgatgctgtg
cagagggcccgccagattgccgcgaagataggaggcgaagccaccggcggagttaacaac
accccagagttcaactttggagggcagaaaaggcagttagaggatggagatgtgtttggg
tttccttctccagaccagccagagtgtaagaaactggcaacccaacctgaacccattccc
cctccgcttgctccagttcatcctccaaggtcgtcttccatgacagaagagtatcgtgtt
ccagatggcatggtgggactcatcattggtcgtggaggagaacagatcaataagattcag
caggagtctgggtgcaaagtacagatatcaccagacagcggcgggatgcctgagagggta
gtttccctgactggaagccctgattctgtgcagaaagctaagatgttgcttgatgacatt
gttgcaagaggtcgaggtggtccccctagccaattccatgacaactccaatgggcagaat
ggatccttacaggaaattatgatccctgctggtaaagccggactgattattggcaaaggt
ggagaaaccataaagcagttacaggaacgagctggtgtcaagatgattctgatacaggac
gggtcccaaaataccaacatggataagcctctgcgtatagtgggagaaccgttcaaagtg
cagcaagcctgtgaaatggtgatggatcttctgcgggaaagggaccaggccaactttgac
agaaatgagtatggttcacgaggtggaggaggaggaggaggaggtggtattgatgtacct
gtcccccgacactccgtgggggttgttataggacgcaatggggatatgattaagaagatc
cagaatgatgccggtgtcaggatacagttcaaacaagatgatgggacaggtcctgacaaa
atcgctcacatcatggggcccccagataggtgcgagcacgcagcaaggattattagcgat
ctccttcagagtttaaagactgggcccccgggtcctccaggtccaggaatgcctcccggt
ggcagaggaaggggtcgggggcagggtccttggggtcctcctggtggtgaaatgacgttc
tctatacccactcacaagtgtggactggtgattggaagaggtggggaaaatgtgaaggca
attaatcagcagactggagcatttgtggagatctccaggcagccgccgcccaacggggac
cccaatttcaagatgtttactattagaggcaacccccagcagatcgaccacgccaagcag
ctgattgaggagaagattgagggtcctctttgtccaatcggacctggtccacctggccca
ggcccatcgggtcccatgggaccttataacccaggcccctaccagcccggtcctccagga
gcccctccacaccaaggaccccctcctcctcctccacctcatcagtaccctcctcaaggc
tggggaagcacatatccccagtggggccagcccccagcacctcacgaccccacaaaacca
cctgctcccacggaccccagcgctgcatgggctgcttactactctcactactaccaacag
ccccctgctcccgtcccagggcaacccccagctgttcctgtacccccaccccaaggagaa
cccccacaacagcccccgcctgccagccagcctgactacacaaaggcctgggaggaatat
tacaagaaaatgggtcagcaaactccgcagccggcggggcagccagactacacaaaagca
tgggaggaatattacaagaagcaagcagccgctcaagcagcagcaactccaggagcaccg
gcggcggcggcggcagcagcagcaacagcggctccacctgcagcacagccagactatagc
gcggcatgggcagaatattaccgacagcaagcagcatattacggacaggcaccgggagct
ccccccacacagcccccaccggcacagccggggccacaggcccaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (9)   
   RefSeq(nuc) (5)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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