KEGG   Xenopus tropicalis (tropical clawed frog): 100170589
Entry
100170589         CDS       T01011                                 
Symbol
sf3b2
Name
(RefSeq) splicing factor 3B subunit 2
  KO
K12829  splicing factor 3B subunit 2
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100170589 (sf3b2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xtr03041]
    100170589 (sf3b2)
Spliceosome [BR:xtr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    100170589 (sf3b2)
 Complex B
    100170589 (sf3b2)
 Complex C
   U2 SnRNP specific factors
    100170589 (sf3b2)
SSDB
Motif
Pfam: DUF382 PSP
Other DBs
NCBI-GeneID: 100170589
NCBI-ProteinID: XP_002935399
Xenbase: XB-GENE-5875780
UniProt: A0A6I8Q354
Position
4:complement(40082001..40102281)
AA seq 763 aa
MAETADGSREDIMDLASPQVRDDAEISSTAVRLAQMAGMPLPTLQAPPPPPGLGRGFPIG
LPPRITTDTDGVKQSQGPTLSLQPKVTLIDQEVSTTRSPLLPRGTLPISSIPPLMSSTSR
PRVQSQPSGEDSKEADDSSTGPKIPQVLEKILQLKELRQEELVSLPATTEEEDIDADSRY
VNTASEAEEDNNVLSKKEKKNRRRRNRKKRTRKRMVGSESAVVDELNEAAEPDLAGGKLE
IEYVTEEPDIYDPNFIFFKRIFQAFKLTDDVKREKEKEPEKVEKIEPAAPRKRFEEEQMD
NDSDSDEEDKKQDAPKLSKKKLRRMNRFTVAELKQLVSRPDVVEMHDVTAPDPKLLVHLK
GTRNSVPVPRHWCFKRKYLQGKRGIEKPPFQLPDFIKRTGIQEMREALQEKEEQKTMKSK
MREKVRPKMGKIDIDYQKLHDAFFKWQSKPKLTIHGDLYYEGKEFETRLKEKKPGDLSDE
LRITLGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNSPIPEGCSFGYHAGGWGK
PPVDEMGKPLYGDVFGTNASDFQSKNEEEDIDRTPWGELELSDDESSSEEEEDESDEDKP
DETGFITPADSGLITPGGFSSVPAGMETPELIELRKKKIEEAMDGTETPQLFTVLPEKRT
ATVGGAMMGSTHIYDMATAMSRRGTATEPQGVEIALAPEELELDPSAMTQKYEERVREAQ
EQVQKEDFSDMVAEHAAKQKQKKRKGQPQDSRAGGKKYKEFKF
NT seq 2292 nt   +upstreamnt  +downstreamnt
atggcggaaactgcagatggaagcagagaggatattatggatcttgcttctccacaggtt
cgagatgatgctgaaatatcctctactgctgttagattggcacagatggctgggatgcct
ctacccacacttcaggctcctcccccacctcctggtctcggaagaggttttccaataggt
ttgcctcctcgcataactactgacactgatggggtaaagcagtcacaaggtccaactctt
tcactgcagccaaaggtgacacttatcgatcaggaagtctccacgacacggtcacccctt
cttcctagaggtaccctccccataagctcaatcccaccattgatgtcctccacaagccgc
cctcgagtccaatcacaaccttctggagaggattccaaggaagcagatgacagctcaaca
ggacctaaaatccctcaggtccttgaaaagattcttcagcttaaggagctccggcaagaa
gagcttgtatctttgccagcaactactgaggaggaagacattgatgcagactcccgttac
gttaatacagcttcagaggcagaagaggataataatgtcctaagtaaaaaagagaaaaaa
aatcgaagaaggagaaaccgaaagaagcgaacacgtaagagaatggttggctcagaatct
gcagtagttgatgagcttaatgaagctgccgaacctgatcttgcaggtggaaaactggag
atagaatatgtgacagaagaacctgatatctatgatcccaactttatcttcttcaagaga
atattccaggcctttaagctgacagatgatgtgaaacgggagaaagagaaggagcctgaa
aaggtggagaaaattgaaccagcagctccgagaaaacgatttgaggaggaacagatggac
aatgacagcgacagtgatgaagaggataaaaagcaagatgctcccaaattgtctaaaaaa
aaattgagaagaatgaacagatttacagtagccgaactaaaacagttggtatcacgacca
gatgtggtagaaatgcacgatgtcactgctccagatcccaaactactagttcatctaaaa
ggaactcgaaattcggtccctgttccacgtcactggtgtttcaaacgaaaatatcttcaa
ggaaaaaggggtattgaaaaacctcctttccaactccctgatttcatcaagagaacaggc
atacaggagatgagggaagcactacaggaaaaggaagagcaaaaaaccatgaaatctaaa
atgagggagaaggtgaggccgaagatgggaaaaattgacattgactatcaaaagttgcat
gatgcgtttttcaaatggcagagcaaacccaagcttactattcatggagatttatattat
gaggggaaggagtttgagacccgcctgaaggagaaaaaaccaggtgatctctctgatgag
ctaaggattacgctaggaatgcctgtgggtccaaatgcccataaagtgccccctccctgg
cttattgcaatgcaaagatatggaccacccccctcttaccccaaccttaaaataccaggg
cttaactcccccataccagagggctgttcctttggatatcatgctggaggttggggaaaa
ccccctgtggatgaaatgggaaaacctctttatggtgatgtgtttgggaccaatgcctca
gatttccagagcaagaatgaagaagaagatatagacagaaccccgtggggagagctggaa
ctatccgatgatgaatcatcttcagaggaagaagaggatgagagtgatgaagataaacct
gatgaaactggatttattaccccagcagacagtggtttaattaccccgggaggcttttct
tctgtccctgccggcatggagacgcctgagctgattgagctgaggaaaaagaagattgag
gaagccatggatggaacggagacgccacaactctttacagtacttccagaaaagaggact
gctactgtgggtggagctatgatgggctccacccacatctacgatatggccacggccatg
tctcgcagaggtaccgccactgagccacagggcgtagaaattgctctggcccctgaagaa
ttggaattggatccgtcggcaatgactcagaaatatgaggaacgtgtaagggaagctcag
gagcaggtacagaaagaagactttagtgacatggtggcagagcatgcagcgaaacaaaag
caaaagaagcggaaggggcaaccacaggattcccgagcaggtggcaagaaatacaaagag
ttcaagttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system