KEGG   Xenopus tropicalis (tropical clawed frog): 100216048
Entry
100216048         CDS       T01011                                 
Symbol
scfd1
Name
(RefSeq) sec1 family domain-containing protein 1
  KO
K19998  sec1 family domain-containing protein 1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    100216048 (scfd1)
Membrane trafficking [BR:xtr04131]
 SNARE
  SNARE associated proteins
   Syntaxin-binding proteins
    100216048 (scfd1)
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Others
    100216048 (scfd1)
SSDB
Motif
Pfam: Sec1
Other DBs
NCBI-GeneID: 100216048
NCBI-ProteinID: NP_001135508
Xenbase: XB-GENE-941809
UniProt: B4F6K9
Position
8:113047940..113095097
AA seq 632 aa
MAASIREKQTVALKRMLNFNVPLVKSSTGEPVWKVLIYDRFGQDIISPLLSVKELRDMGV
TLHLLLHSDRDAIPDVPAVYFVMPTEENVDRICQDLRTQLYESYYLNFISAISRSKLEDI
ASAALTANTVSHVSKVFDQYLNFITLEDDMFLLCNQNKDLVSYRALNRSDITDTEMETVM
DTIVDSLFCFFVTLGAVPIIRCARGNAAEMVAVKLDKKLRENLRDARNSLFTGDNLGAGQ
FSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEEAPAVESSPSGARPK
KKNKKSYDLTVADKFWQKHKGSPFPEVAESVQQELESYRTQEDEVKRLKTIMGLEGEDEG
AISMISDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKTRKLDVYFEYEEKLMS
KSNLDKSLLDIISDPDAGTPEDKMRLFLIYYITSAQAPSEVDLEQYRKALEDAGCSLAPL
NYIKQWKAFAKMASAPASYGIGAAKSKGLLSRVMNTGSQFVMEGVKNLVLKQQNLPVTRI
LDSLMEVKSNPETDDYRYFDPKMLRGNDSSVPRNKNPFQEAIVFVVGGGNYIEYQNLVDY
IKTKQGKHILYGCTELFNATQFVKQLSQLGQK
NT seq 1899 nt   +upstreamnt  +downstreamnt
atggctgcttctatccgggagaagcagacggttgctttaaagcgtatgctgaatttcaat
gttccccttgtaaagagcagcacaggagagccagtatggaaggttcttatttacgatcga
tttggccaggacattatctctcctcttctgtcggtgaaggaattaagagacatgggagtc
actttacatttgcttttacattcagatcgtgatgctattccagatgtccccgctgtatat
tttgtaatgcccacagaggaaaatgtggacaggatatgccaggacctaaggacacagttg
tatgagtcctattatttaaacttcatctccgccatttctcgcagcaaactagaggatatc
gcaagtgcagcattaacagccaacactgtgtctcatgtctcaaaggtttttgaccaatac
ctgaattttattactttagaggatgacatgtttctgctgtgtaaccaaaacaaggacctg
gtgtcttaccgggctttaaacagatctgatatcacggacacagaaatggaaacagtgatg
gacacaattgttgacagccttttctgcttcttcgtcacactgggtgctgtgcccattata
cgatgtgcaaggggaaatgctgcagaaatggtggcagtgaaacttgataagaaactgaga
gaaaacctgcgtgatgccagaaacagcctgttcactggagataacctgggtgctggacag
ttcagcttccaaaggcctttattagtcctcgtggacagaaacatagacctggcaactcct
cttcaccacacatggacatatcaggccctggtgcatgacgttttggatttccacctaaat
agggtaaatttggaggaagctcctgcagttgagagcagtccttctggtgcacgacctaaa
aagaagaacaagaaatcctatgatctgactgttgcagataagttctggcagaagcacaag
ggcagcccctttccagaagtggcagagtcagtccaacaggagctagaatcttaccgaacc
caggaggacgaagtgaagcggctgaaaaccatcatgggcttagaaggagaagatgaagga
gctatcagtatgatttcagacaatacagcaaagctaacatcagccgtcagctctcttcct
gagctactggaaaagaaaagattaatagatctgcataccaacgtggctacagcagtcttg
gaacatatcaagacacggaagttagatgtctattttgagtatgaagagaagcttatgagc
aagtctaatttggataaatcacttctggacattatttctgacccggatgctggaacacca
gaagacaagatgcggttgttcctgatctattacatcacgtctgcccaggccccttccgag
gtggaccttgagcagtatcgcaaagctctggaagatgcaggctgcagtttggcaccatta
aattatataaagcagtggaaagcttttgccaagatggcttctgcacctgccagttatggg
attggagctgcaaaatccaaaggcttgctttcccgggtcatgaatacaggctcacagttt
gtgatggaaggagtgaaaaacctggttctaaagcagcagaatctgccagttaccaggatc
cttgacagtttaatggaagtaaagtctaatccggagactgacgactacagatactttgac
cccaagatgctacggggaaatgacagctctgtcccaagaaacaagaatcctttccaagag
gctattgtgtttgttgtaggaggtggaaactacattgagtaccagaacttagtagactac
ataaagaccaagcaaggaaagcacattctgtatggatgcacagaactatttaatgctaca
cagtttgtgaagcagctgtctcagttgggtcagaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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