KEGG   Xenopus tropicalis (tropical clawed frog): 100216093
Entry
100216093         CDS       T01011                                 
Symbol
recql5
Name
(RefSeq) ATP-dependent DNA helicase Q5
  KO
K10902  ATP-dependent DNA helicase Q5 [EC:5.6.2.4]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xtr03400]
    100216093 (recql5)
Enzymes [BR:xtr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     100216093 (recql5)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     100216093 (recql5)
SSDB
Motif
Pfam: DEAD Helicase_C RecQ_Zn_bind RecQ5 ResIII KIX_2 TFIIS_M SRI
Other DBs
NCBI-GeneID: 100216093
NCBI-ProteinID: NP_001135548
Xenbase: XB-GENE-958080
UniProt: B4F6V5
Position
10:complement(44660104..44694867)
AA seq 1050 aa
MSSSSSSSSSSRPRCRIQTTLKNVFGFNSFRSDLQENATRAVVKGETDVFVVMPTGAGKS
LCYQLPAVLSVGITVVISPLIALIQDQVDHLVALKIKACSLNSKLPLPERKKIIQDLESE
APQIKLLYITPEMAASASFQPILAQLLSRSLLSYLIIDEAHCVSEWGHDFRPDYLRLGSL
RSRIPHTPCVALTATATKQVQDDIIASLKLRQPVSMFKTPCFRSNLFYDVQLKDLVGDPY
GDLKEFCLKALGTKTPQGGFPGCGIVYCRTRDACEEVAVQLSQRGVLSKPYHAGLKAGDR
VTIQNDWMDGTVPVIVATISFGMGVDKANVRFVAHWNIAKSLAGYYQESGRAGRDGKQAF
CRLYYSRTDRDQVGFLIRKEIAQAQAKRGDNKASDKAGMAGFDAMVSFCEDTGCRHAAIA
AYFGDEKPQCNKSCDSCKNPLAVKRQVEQLEGLFQSGRSRTCIEKPAGPKGPFGFEPGLY
EGGRKGYGFARYDDDDDEGGAAESAEDRKRVWNSFYQKQMNLRKSKELEDFIPPSDDCPL
KDASSDKIPKLTVKAREHCLNILEEALAKNARAAAAEHRTDVESCAVDLEYEVFRSSKLC
NLYKAAIVKKVKEIEALKDGELHSALGSSNSEQRTETPATDGFMSASQMLTSKCKRVGAL
SSFQSASDLLRTTQPERRPVESSQGTSQEMAASNDSSIPDKPDSKKVASPSKAARPSKKR
QELANAAKKDSQNISKFFSSHCKAQPQSGKNDVQAKPGNPTLKEGSLSQKDDTLTSDGLQ
GEPPAPVSTELGEGAESSPEEQSLCRDTWAGQIVQPSQYNCRNVPAVEPSDTGSLYVQPG
DSRPGQPLQDHGRTSVSLFHPDPLKPVEDESEPEEHQEMSTKTSREEAPSKPRTRDREKR
PAEGQDSEGPVRKRPREEIKSSSILAPVHKVSTNQGKKKVTFDPNLCPHDKEGTAKILQP
PSGNKVMTLKETADVVVKYLTPFFREGKFASKDLFKAFARHLSHHLTGEDKMPLRKNVKE
EAQKLIKAFFKDRPKCESEEDWKDLLGPAP
NT seq 3153 nt   +upstreamnt  +downstreamnt
atgagttcttcctcctcctcctcctcttcttctcgcccgaggtgccgaattcagacgacg
ctcaagaatgttttcggatttaattccttccgctcagatctgcaggaaaatgcaactcgg
gccgtagtaaagggtgaaacggatgtgtttgtagtgatgcccacaggagcaggaaagtcc
ttatgttaccagcttccagctgtcctctctgtggggatcacagtggtcatctcacctctc
attgcactgattcaggatcaagtagatcacctcgttgccttaaagatcaaggcctgctcg
ctaaactccaagctgccactcccagaacgcaagaaaatcattcaggatctggagagtgag
gccccccagataaagctgctttatatcactcctgagatggcagcctccgcatccttccag
ccaatcctggcgcagcttctctcccgcagcctcctgtcttaccttattatagacgaagcg
cactgtgtctctgagtggggacacgacttccgaccggattacctgcgcttaggctccttg
cgttcccgcatacctcatactccttgcgtggcactgacagccacggccaccaagcaggtc
caggatgacatcattgcctcactgaaattgcgccagccggtttccatgtttaaaacgccg
tgttttcgttccaacttgttttacgacgtgcagttgaaggacttagtgggtgatccttat
ggggacctaaaggagttttgcctgaaggccctaggaacgaaaactcctcaagggggcttc
ccaggctgcgggatagtgtactgccgtaccagggatgcgtgtgaggaggtggcagtgcag
ctctcccagagaggtgtcctctccaaaccctatcatgcaggtctcaaagctggagacaga
gtgactattcagaatgactggatggatgggacggtaccagttattgtagctacaatcagc
tttggcatgggagtggacaaggctaatgtgaggtttgtggctcattggaacattgctaag
tcgttggcaggctattaccaggagtctgggagggctggaagggatggcaagcaagctttt
tgccgtttatactactccagaactgaccgtgaccaagtcggcttcctgatcagaaaggag
attgcacaggcccaggccaagagaggagataacaaggcatcggataaagcaggtatggct
gggtttgatgcaatggtgtccttctgcgaggatacagggtgccgccacgctgccatagct
gcctattttggggatgagaaaccgcagtgtaacaaatcctgcgacagctgcaagaacccg
ctcgcagtgaaacgccaggtggagcagctggagggcctgttccagagcgggagaagcaga
acctgcatcgagaagcccgcaggacccaagggacctttcggtttcgaaccaggtctctac
gaaggaggcaggaagggttatggctttgccagatatgatgatgacgacgatgagggtggc
gcggcggaatctgcagaggaccgcaagcgcgtttggaacagtttctaccagaagcaaatg
aacctgcgcaagagcaaagagctggaagactttattcctccaagtgatgactgtcccctt
aaagatgcatccagtgataaaattcccaagctgaccgtgaaggctcgggagcactgtctg
aatatcctggaggaagctttggccaagaacgcccgggcagctgctgcagaacatcgaacc
gacgtagaatcctgcgcggttgatcttgagtatgaggttttccggagcagcaaactgtgc
aatctctacaaagcggccattgtgaaaaaagtaaaggaaattgaagcgttgaaggatggg
gagttgcacagtgctttggggtccagcaactcggagcagagaacagaaactccggccact
gatggatttatgtctgcctcccagatgctaacatctaaatgcaagagagttggggcgctc
tcctcatttcagtcagcctcggacttgttacgtaccactcagccagaacggagacccgtt
gagtccagtcaagggaccagccaggagatggcggccagcaatgacagcagcattccggac
aagccagacagtaagaaggtggccagcccaagcaaagcagcccgacccagcaagaaaaga
caggaacttgccaatgcagcaaaaaaagactcccaaaatatctccaaatttttctcaagt
cattgcaaagctcagccacagtctggcaaaaatgatgtccaagccaagcctggtaaccca
actctaaaggaggggtcattaagccaaaaggatgacactttaacttctgatggactccaa
ggggaacctcctgcacctgtgagtacagagttaggtgaaggggcagaaagcagcccagag
gagcagagtctttgtagggacacctgggctgggcagatagtacaaccatcacagtacaac
tgtaggaatgtccctgctgtagaaccatcagacactggcagcctgtatgtacagcctggg
gactcccgaccggggcagccattgcaggaccatgggaggacttctgtctccttatttcat
cctgatccactcaagcctgtggaagatgaatcagaaccagaggaacaccaagagatgagc
acaaagactagcagggaggaggcgcccagtaagcccaggacccgagacagggaaaagaga
ccggcagaaggacaggactcagaaggcccggtcagaaaaaggccaagagaagagataaag
tcttcctccattttggccccagttcacaaagtcagcactaatcaggggaagaagaaagta
acctttgaccccaacctgtgcccacacgataaagaagggaccgccaaaatcctgcagccc
ccttcggggaacaaagtgatgaccctaaaagagacggctgatgtggtggtgaaatacctc
actccgtttttccgagaaggaaagtttgcctcaaaggatctgtttaaagcatttgcaagg
catctctctcaccatctgacgggagaggacaagatgcccctccggaaaaatgtgaaagaa
gaggcccagaagttgatcaaggcatttttcaaggaccgccctaaatgcgagagcgaagaa
gactggaaggacttgctgggccctgcgccatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (29)   

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