KEGG   Xenopus tropicalis (tropical clawed frog): 100216236
Entry
100216236         CDS       T01011                                 
Symbol
tex10
Name
(RefSeq) testis-expressed sequence 10 protein
  KO
K14827  pre-rRNA-processing protein IPI1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    100216236 (tex10)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:xtr03009]
    100216236 (tex10)
Ribosome biogenesis [BR:xtr03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    100216236 (tex10)
SSDB
Motif
Pfam: Ipi1_N Vac14_Fab1_bd
Other DBs
NCBI-GeneID: 100216236
NCBI-ProteinID: NP_001135675
Xenbase: XB-GENE-956933
UniProt: B5DEA9
Position
6:65998617..66033036
AA seq 929 aa
MSSKRKRQEDFQKVKLKVGRKKPRADQITDTTFKSKFIHLSKQLKEDQSSPTNERKLNIT
DLLSQMHHYNAGVKHSALVGLKELLSTYPSIIESHISSIISEVAAVFTDKDSAVRVAAVS
LLQYLVPIIPPEKIAPFFPLVSAHLSSAMTHIIMGIQQDSLRILDILLEEYPELLIDRSN
MLLHNFLELISHQKTSKEFKSANQKSSWTLAVSVDQKIISQNWRLNVLIRLKKFLHAFAR
QASKSIPDDEFTETSNKSLPKRKSQDLTWIKQTSCKQFINLYEHCGSQHTIDSSFQLRSF
VMTTAKSDECTFSTRNLKAFTETIIPLLIECWIEESPSTVIEDISKHFLCPSSHHLLQQV
LSIISLLWKLCELQDGPQKLDGWLRRTYLADFKHHFMRQFPYSVLENAKQKKNKKKSNRD
SIYLQNGLDHLLLNLTLCDIMIPLASSPTLPEDSEWLAVIRMFVSEKLNQGYQLNCKQLK
RLLDVTNKLLNIQRNRVATEKLIHSVYVLYQQRELQLSVRSMLLKFLKKVYLKEEEVCHK
LGRSRSNILSRWISGLPQQLANLGSRSPQLSAIIIDTIYTAATRSHIELLQSLQTTACQI
YDPKEGPVVLLPPESQQQLVQLLYFLPYMSSDLLIRLSKCCITERLSPNLGSMLIGVLHA
RSSFASWSCLAQDCTMSNQDYFSFLFSSLIGFSAERLSWMQGTKHTTRVSKTQVSPLCLY
LTDQQQFARHWMITKAACCSLSSVSARSQCFDILQNAIIKHLGELTVLPDSTAGSILYAI
NTLFDQSCVPSERLYTFLPSCCYSIFSFLLTVGKDFEHLPKRDPLWAACISLLSLLPNVL
KFMLKNLQVSRACQEELPVIAQLLRLLLQNPQLRSHMMTNAFLVQQTLQDVMNLKCCEIQ
EQWLTDLQYCFNAYLPKQPLESPSFSAVY
NT seq 2790 nt   +upstreamnt  +downstreamnt
atgagtagtaaacgtaaacgtcaagaagattttcagaaggtgaaactgaaagttggacgg
aaaaaaccaagagcggatcaaattaccgacaccacttttaagtccaagtttattcatttg
agcaagcaactaaaggaggaccagtcgtctcctaccaatgaacgaaagttaaacatcacg
gatcttctctcacagatgcatcattataatgctggagttaagcacagtgcccttgttggt
cttaaagaacttctttctacctatccttcaataattgaatcacatatttcaagtataatc
agtgaggttgctgctgtatttacagataaagactcagctgttagagtagctgctgtttct
cttttacaatatttggttccaataattcctcctgaaaaaattgcccccttttttcctctt
gtaagtgcccatctatccagtgcaatgactcatataattatgggcattcagcaagactca
ttacgaatcttggatattctgttagaagagtatccagaattacttattgaccgcagcaat
atgttgctacacaattttttggagcttatttcccatcagaagacctccaaggaatttaag
agtgcaaatcagaaatctagttggacgttggctgtcagtgttgaccaaaagattatttct
caaaactggcgattaaatgtgctcattaggctgaaaaagtttcttcatgcatttgccaga
caggcttcaaaaagtatcccagatgatgaatttacagagacatcaaacaaaagtttgccc
aaaagaaaatctcaagatcttacttggataaagcaaacaagttgcaagcagtttatcaac
ttatatgaacattgtggaagtcagcacaccatagattcttcatttcagttgaggtctttc
gtgatgaccacagccaagtctgatgaatgtactttttcaaccagaaatttgaaagcattt
actgagaccataattccattattgattgaatgctggattgaggaatcgcctagtacagtc
attgaagatatttctaaacattttctatgtccatcatcacatcatcttctgcaacaggtt
ctaagcattatttctttgctttggaagctttgtgaacttcaggatgggccccagaaattg
gatggttggcttcgtagaacttatcttgcagattttaaacatcattttatgagacagttt
ccatactctgtgcttgaaaatgccaaacagaagaaaaataaaaaaaaaagtaacagggat
agtatatatcttcaaaatggtctggatcatcttttattaaacttaaccttgtgtgacatc
atgatccccctggcaagttctcctactcttccagaggattcagaatggttagcagtgatt
cgaatgtttgtttctgagaaactgaaccaagggtaccagctaaattgtaagcaactcaaa
aggctactggatgtaacaaataaacttctgaatattcagagaaacagagtggccacggag
aagttgattcattcagtttatgtattgtaccagcagagagagctgcaactgtcagtgcgt
tccatgcttctaaaattcttaaaaaaagtatatcttaaagaagaggaggtttgtcacaag
cttggaagaagccgaagtaatattttgtctcgatggatctctggcttgcctcagcaactt
gctaaccttggctcaagaagtccacaactttctgccattattattgatacaatatacact
gctgctactcgttcacacattgaattacttcagagccttcaaaccacagcatgccaaatc
tatgatcctaaggaaggacctgttgtactgcttccgccagagtcgcaacaacaattggtg
cagcttttatatttcttgccttatatgtcatctgatttacttattcggttaagtaagtgt
tgcatcacagaaagactttcacccaatcttggttccatgctcattggagtattgcatgca
aggtcctcctttgcgagttggtcatgcttggcacaagactgtacaatgagcaatcaggac
tattttagttttttgttctcttctctcattgggttttcagcagagaggttgtcatggatg
caaggcacaaagcatactactcgtgtcagcaaaacacaggtttcaccattgtgcctatat
ttgactgatcagcaacagtttgctcgccactggatgattacaaaggcagcttgttgcagt
ttgtcctctgtgagtgcaaggagtcagtgctttgatatccttcagaatgcaatcataaag
cacttgggtgaattaacagtcctccccgacagtacagctggatctatattgtatgccata
aataccctttttgaccaaagttgtgttcctagtgaacgtctgtatacttttttaccttca
tgctgttacagtatttttagcttcttacttacagttggaaaagattttgagcatcttcct
aaaagggaccctctctgggcagcttgcatttctttgttatctttgctccctaatgttctg
aagttcatgttgaagaatcttcaagttagccgagcctgtcaggaagagctccctgttatt
gcacaattgcttcgtctcttactacaaaacccccaacttagaagtcacatgatgacaaac
gcttttctggtgcagcaaaccctccaggatgttatgaacctgaaatgttgtgaaattcaa
gaacagtggctgacagaccttcagtactgcttcaacgcgtatcttcccaaacaacctctt
gaatcaccatctttttctgcagtatactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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