KEGG   Xenopus tropicalis (tropical clawed frog): 100327255
Entry
100327255         CDS       T01011                                 
Symbol
nudt16
Name
(RefSeq) U8 snoRNA-decapping enzyme
  KO
K16855  U8 snoRNA-decapping enzyme [EC:3.6.1.62 3.6.1.64]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00230  Purine metabolism
xtr01100  Metabolic pathways
xtr01232  Nucleotide metabolism
xtr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    100327255 (nudt16)
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100327255 (nudt16)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xtr03019]
    100327255 (nudt16)
Enzymes [BR:xtr01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.62  5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
     100327255 (nudt16)
    3.6.1.64  inosine diphosphate phosphatase
     100327255 (nudt16)
Messenger RNA biogenesis [BR:xtr03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     100327255 (nudt16)
SSDB
Motif
Pfam: NUDIX
Other DBs
NCBI-GeneID: 100327255
NCBI-ProteinID: NP_001165006
Xenbase: XB-GENE-972483
UniProt: F7C388
Position
8:34762519..34769389
AA seq 213 aa
MAETRRPDSGDMEVEKPRPRNITREESLKLEGYKHACHALLHAPSTAKLFDRVPIRRVLL
MMMRFDGRLGFPGGFVDTRDTSLEEGLKRELQEELGPALTTVEVSVEDYRSSQVREYPQK
CVTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLVRVPLYTLRDGVGGLPAFLCNNFIG
NSKSQLLYALRSLKLLRENQIQEVLKASHKLHY
NT seq 642 nt   +upstreamnt  +downstreamnt
atggcggaaacaaggaggccagacagcggggacatggaggtggagaagccgcggccccgg
aacataacccgggaagagtcactaaagctagaaggctataagcacgcctgccatgctctc
ttacacgcacccagtaccgccaagctgtttgaccgcgtccctattaggcgtgtattgctg
atgatgatgcgttttgacgggcgcttgggattcccaggtggttttgtagacactcgagac
acatctctggaagaaggtctgaaacgggagttgcaagaggagcttggtcctgctcttact
accgtggaagtgtcagtggaagattatagaagttcccaagtcagggagtaccctcaaaag
tgtgttactcacttctacattaaggagctgaaactggaggaaatagagaggattgaagct
gaggctgtgaatgccaaagaccatggattagaggtgatgggcctggtccgcgtgcccctg
tataccctgcgggatggagtgggaggtcttcctgctttcctgtgcaacaactttattggg
aactccaaaagtcaacttctgtatgcactgcgctccttgaaactgctacgggagaaccag
attcaggaggtcctgaaggcaagccataaacttcattactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (5)   
   KEGG ENZYME (2)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (37)   

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