KEGG   Xenopus tropicalis (tropical clawed frog): 100379934
Entry
100379934         CDS       T01011                                 
Symbol
rasef
Name
(RefSeq) ras and EF-hand domain-containing protein
  KO
K17199  Ras and EF-hand domain-containing protein
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04031 GTP-binding proteins [BR:xtr04031]
    100379934 (rasef)
   04990 Domain-containing proteins not elsewhere classified [BR:xtr04990]
    100379934 (rasef)
GTP-binding proteins [BR:xtr04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab45
    100379934 (rasef)
Domain-containing proteins not elsewhere classified [BR:xtr04990]
 EF-hand domain-containing proteins
  Other EF-hand domain-containing proteins
   100379934 (rasef)
SSDB
Motif
Pfam: Ras Roc Arf EF-hand_7 EF-hand_6 EF-hand_1 MMR_HSR1 GTP_EFTU EF-hand_5 EF-hand_8 MYO10_CC EF-hand_4 AAA_25
Other DBs
NCBI-GeneID: 100379934
NCBI-ProteinID: XP_002932289
Xenbase: XB-GENE-5734494
UniProt: F7CD83
Position
3:complement(107546319..107572663)
AA seq 653 aa
MGSSQELTRLQSLFSACDVRGSGLVELDDFASVCTDLGVEPSLVEPLFRMLDVDGDGIID
FQDFAAGFEEVSQTLNLQPSHQPPAWEEFEGRLRGELQHLSSSTKEWLYGFYQDLQGISV
PGLIQQYERLVENVFYDFRAQRLNIEKLESVLKRTEGATAKQIAEMEEDLQHHLTKMERQ
IQDEELLRLNTAIQELQRKHEMETLSLQTKIDRMTKHKDERLAMESKEESAKLKNQIFDL
SQENEELKMNLLRAQTDISLLQTEVDRLKDYMADQQSHHNREKDLLNSMVEERRTFANQI
QILNEANKSLYDNNDSMRSTLTNMENERKRHSSPSRLSEPSVITYSSFTADEDPYRKFSD
VATWADRCIDSGVSLPRSVGYSDVDSEFGSEHSNSSEERWNGSIHYGNSEIESEVDGKLK
WSPSRPLSRAESSASSKRKLPAFTPRKQGVPSEEVSQASSPIYRLVLAGDAGSGKSSFLL
RLCLNEFRGDIPTTLGVDFQIKKLLVDGDHTTLQIWDTAGQERFRSIAKSYFRKAHGVLL
MYDVTSERSFLNVRQWIDEIKNSSDKPIPMMLIGNKTDIRTELDGIQTSMGEKLAMAYSS
LFCETSAKDGTNVVEAVLHLAREVKKCTDLEGENKEPVTLLSIQDKKANCCKI
NT seq 1962 nt   +upstreamnt  +downstreamnt
atgggctcctcgcaggaattaacgcgacttcagagcttgttctcagcgtgcgatgtgagg
ggctccgggctggtggagctggatgacttcgcctcggtgtgcactgatctgggggtggaa
cccagcctggtggagccgctctttcggatgctggatgtggatggggacggaatcattgat
ttccaagacttcgcagcgggattcgaggaggtctcccaaactctcaacctgcagccttcc
catcagccccccgcctgggaggagtttgagggcaggttgaggggagagctgcagcacctg
agcagttctacaaaagagtggttgtatggcttttaccaagatctgcaggggatatctgtt
ccgggactcattcagcagtatgagagactggttgagaatgtgttctatgattttcgggct
caaaggctcaacattgagaagttggaatctgtacttaaaaggactgaaggggcaacagcc
aagcagattgcagaaatggaggaagatttacagcatcaccttaccaagatggagagacag
atacaagatgaggagttgctgcggctgaacactgctatccaggaactacaaagaaagcat
gagatggaaaccctcagcctgcagacaaagattgatcgcatgacaaagcacaaggatgaa
cggctggcaatggaatccaaggaggaaagtgctaagctgaaaaaccagatctttgacctt
tcacaggagaacgaggagctgaagatgaacctgcttagagcacaaacggacatctctctg
ctgcagacagaagtggacagactgaaggactacatggctgatcagcagtcgcaccataac
agagagaaggacctgctgaatagtatggtagaggaacgaagaacatttgcaaaccaaatt
cagatactaaatgaagccaacaaatctctgtatgacaataatgacagcatgcgctctact
ctcaccaatatggaaaatgaaaggaaacggcattcttcccccagtcgactcagcgaaccc
tctgtgatcacctacagtagttttacagcagatgaagatccctacaggaaattctctgat
gtagccacttgggctgacagatgtatagacagtggggtatccctgccacgcagtgtgggc
tacagtgatgtggacagtgaatttggaagtgagcatagcaatagctcagaggaacgctgg
aatggaagcatccattatggaaactcagaaattgagtcagaagtagatggaaaactaaaa
tggagcccgtctcgccctttaagccgtgctgagtcttcagcttcatctaagagaaagctt
cctgcctttacacccagaaaacagggggtgccatcagaagaggtttcccaggcgtccagc
ccaatatacagacttgtgcttgctggtgatgctggttctgggaaatccagtttccttctc
agactgtgcctgaacgagttccggggagacattccaacaacattaggtgttgatttccag
ataaagaagctcctggttgatggagatcacacaacattacagatctgggacacagctggc
caggagaggttccgcagtatagccaagtcctatttccgcaaggctcacggcgttctgctg
atgtatgatgttacctctgagaggagcttccttaatgtgcgacagtggatagacgagatc
aagaactcttctgacaaacccattcctatgatgctcattggcaacaaaacagacataagg
acggaattggatggcattcagacttcaatgggggaaaagttggccatggcttatagctcc
ctcttctgtgagaccagtgcaaaagatggcaccaatgtcgtagaagctgttctgcacctt
gctagagaagtgaagaaatgtacagacttggaaggagaaaacaaggagccggtgacgttg
ctcagcattcaggacaagaaggccaattgctgcaagatataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (13)   
   Pfam (13)   
All databases (29)   

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