KEGG   Xenopus tropicalis (tropical clawed frog): 100380087
Entry
100380087         CDS       T01011                                 
Symbol
gcc1
Name
(RefSeq) GRIP and coiled-coil domain-containing protein 1
  KO
K20281  GRIP and coiled-coil domain-containing protein 1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    100380087 (gcc1)
Membrane trafficking [BR:xtr04131]
 Endosome - Golgi transport
  Rab GTPases and associated proteins
   Rab associated proteins
    100380087 (gcc1)
SSDB
Motif
Pfam: GRIP bZIP_1 Fez1
Other DBs
NCBI-GeneID: 100380087
NCBI-ProteinID: XP_002939415
Xenbase: XB-GENE-1007438
UniProt: F6RH65
Position
3:89149956..89157960
AA seq 704 aa
MEKLGMSFGGGPSKKELQEQVETQRKQLQQYQGRLKDVVRAYKSLQKEKEALEASLHVLS
TTQEPGTLFSESEEAHDDQHSIHSEDSVDTAGSLPSARGGETSEDERPDPSQRGGIEEAS
GSESGVSTASGEGGQATAVETDRKMVQLKNQLSTLTSALATVTQEKSRMEASYQADKRNA
KQEMEELMLSFVQERTKLQEEIQSIQEQLAETKARLISQQHDRAQEQTDHVIMLKELQRL
LQGERDHRQEAELRLEEARQELAGKLAGISELEGRSEVAEEQNRKLRKDLEELRKEIMEA
RRQGAEPDPAVKKLQAELDRVKEEMHALLQEERKKKLDEEQETMQRFLQEEQRICSLESQ
VSEMSELLGAAETSKQRDQATIRKLRERLIQLEAENKTLALTSSMQTPSEVTFNFNKGED
MDEGPEQHASVLFYQQELQQLKEEFERYKSRAQGVLRTKGAREGELEAGKKQMAELKERC
VSLRLSAEEAESQHKAEMEAAQKQIALMLQSHRQELESVRKEGRDNMARLEEEVRQHRER
VLAVLAEKEQELEKLRETKITSVVPLSVLDSIGNGLELSQGASSTFIVYAEQLSRKEAEI
GNLRRRKHELESELQSMQEKLAEQKEEANILQEQMKKNVRDRRREGANMEYLKNVLLGYL
TLPDPRGRQHTLSALLAVLHFSPEERNAALRAQEGSRWWAGSNR
NT seq 2115 nt   +upstreamnt  +downstreamnt
atggagaaattaggcatgagttttggaggtggcccaagtaagaaggaacttcaggagcag
gtagaaactcaacggaagcaactacaacagtaccagggtcgactgaaggatgttgtgcga
gcatacaagagtcttcagaaagaaaaggaggcccttgaggccagtctccatgtactttcc
actactcaggagccaggcactcttttctcagaatctgaagaggcacatgatgaccaacat
tccatacacagtgaggatagtgtggacacagcaggtagtcttcccagtgctagaggaggt
gagacgagtgaggatgagagaccagatccttctcaacgaggtggaatagaggaggccagt
ggttcagagagtggggtcagcactgccagtggagagggaggtcaagccacagcagttgag
actgaccgtaagatggtgcagctgaaaaaccagctttctacactaactagtgctctggca
acagttacacaagaaaaatctcgcatggaggcttcttatcaagcagataagaggaatgca
aagcaggaaatggaggagttgatgctgagttttgtgcaagagaggaccaaattgcaggaa
gaaattcagagcattcaggagcaacttgcagagaccaaggccagattaattagccagcaa
catgaccgtgctcaggagcaaacagaccatgtcattatgctaaaagagcttcagcgactc
ttgcaaggagaacgagaccaccgtcaggaagcagaactccgactggaggaagcaagacaa
gagctagcaggcaagctagcaggaatatctgagctagaaggaaggtctgaggtagcagaa
gagcaaaacagaaagctgcgtaaagatcttgaggaactgagaaaggagataatggaagct
agacggcagggagcagaacctgacccagcagtaaagaagctccaagcagagctggataga
gtgaaagaagagatgcatgctcttctgcaagaggagagaaaaaagaagctggatgaggag
caagaaactatgcagcgttttctacaggaggagcaacgcatctgttcccttgagtctcag
gtttccgaaatgtcagaacttctaggtgcagcagaaacatccaaacaaagagatcaagca
actattcgcaagcttcgagaacgtctaatacagctagaagcagagaacaagactcttgca
ctaacctcttcaatgcaaaccccatctgaagttacttttaattttaataaaggggaggat
atggatgagggtccagagcagcacgcatctgtgcttttttaccagcaagagcttcagcaa
ctgaaggaggaatttgagcgttataaatcacgtgcacaaggtgtactaagaaccaaaggt
gcacgggagggagaactagaggctggcaaaaaacaaatggcagaactgaaagaacgatgt
gtttctctgcgactttctgcagaagaggctgaaagccagcacaaagcagaaatggaggct
gcccaaaaacagattgcactaatgcttcaatctcaccggcaggagctagaatctgtgcgc
aaagagggtagagacaatatggctcgtctggaggaagaagtgcgacagcatagagaacga
gtactagctgttttagcggagaaagagcaagagctggagaaattaagagaaacaaagatc
acatcagtggtccctctctcagtcctggactcaattggcaatggcctagaactttcacag
ggtgcctcctccacttttatagtgtatgcagaacagttgtcacgcaaagaagcagagatt
ggaaacctgcgacgaagaaagcatgaactggagtcagaactacagagtatgcaggagaaa
ttggcagagcaaaaggaggaggcgaatattctacaggagcaaatgaaaaaaaatgtacga
gacagaagaagggagggggcaaacatggagtatctgaaaaatgtattgttaggatatttg
acattgccagacccaagaggaagacagcatacactgagcgctctgcttgcagtgttgcat
ttttctccggaggaacgaaatgcagcattgcgtgcacaggaggggagtaggtggtgggca
ggaagcaacaggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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