KEGG   Xenopus tropicalis (tropical clawed frog): 100380142
Entry
100380142         CDS       T01011                                 
Symbol
rbbp8
Name
(RefSeq) DNA endonuclease RBBP8 isoform X2
  KO
K20773  DNA endonuclease RBBP8 [EC:3.1.-.-]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    100380142 (rbbp8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xtr03400]
    100380142 (rbbp8)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-C complex
     100380142 (rbbp8)
SSDB
Motif
Pfam: CtIP_N SAE2
Other DBs
NCBI-GeneID: 100380142
NCBI-ProteinID: XP_004915272
Xenbase: XB-GENE-5953134
UniProt: A0A6I8PUS5
Position
6:108891146..108938935
AA seq 856 aa
MNISASTCGSPSSSESLPAGDLFKELWSKLKECHDKELQELLLKINKLKKQRCLDAQRLE
EFYTKNQHLREQQKTLHDTIKVLEDRLRAGLCDRCTVTEEHMRKKQQEFENIRQQNLKLI
TELMNDKNALQDENKRLSEQLHNMQKSRWKSDEENPADTGEGEDGVIPDSPLSTFSLSMV
SRMRRKKDNKHIRYSEKAPEDTLTLERKINSGNRPQATTHVRKGEDILVAETLELSPLPK
KYEVDSEKPVFNLAAVVAETLGLDAQVESQSQSVFNQPRITGAPLFHEGEDSSPRQVKVE
FTEGSMEESQGNDDDGWNTKEASPVFGGPARNIRRSAEMDCISPPLPVGLNSKLISQCSR
NPSDFLFNSVQAKAEDGAQATRLCLGKETDSVISQCSSNGQGVLRCSPNKSVPGGAQMGK
DILDSEHHKQMANRYGKRKNAEAEQEESCESSFDKENNIPIKDIGSERHSMLDKPLDLSD
RFSVLRPQDRSHGSSRGRTKQTFALVPEKPDPKKPLHIDLREDLYHQTKQKKVFVSGLVE
RSAFNLHEDKEVTEEGNQLFDDLEIETVHEPKRNARSVHRGVQPTSVLQPNLHMVQACPE
SQQGKPPIDNMQWSIDPGADLSQYEMDMTMEDSKGGSPAKPELEDMDYTYVSESFLLKMK
KGDPGDSEDESKGQDSFEKMFDKSEYGEYVLCIKDRSPSQSCKERNDLSSMENNKITKEK
EIETKGETYQKQKAFVEPYFQRPEQKKPAMDFPHIEVVRKKDERRKMLGHTCKECELYYA
DLPEEERAKKLASCSRHRFRYIPPSTPENFWEVGFPSTQTCQDRGYIKEELSPCQRPRRR
QPYNAKFSSKIKEQKT
NT seq 2571 nt   +upstreamnt  +downstreamnt
atgaacatctctgcatccacttgtggcagtccaagctcttctgaaagcctccctgctggt
gacttgttcaaagagctctggtcaaaactgaaggaatgccatgacaaggaattacaagaa
ctgcttttgaaaattaacaaactgaaaaaacaaagatgtcttgatgcacaaaggctggaa
gagttttatacaaaaaaccaacatttaagagagcagcagaagacactacacgacacaatt
aaagttcttgaagacagacttcgagctggcctatgtgaccgttgtacagtaactgaagag
cacatgaggaagaagcagcaggagtttgaaaatattagacaacagaatctaaaactcatc
acagagctcatgaatgataagaacgctctccaggatgaaaataaaaggctttctgagcag
ctccataacatgcagaagagcaggtggaagagtgatgaagaaaatccagcagatacagga
gaaggtgaagatggtgttatcccggactccccacttagtaccttttctttaagtatggtg
agcagaatgcggagaaaaaaagataacaagcatatccgttactcggaaaaagcaccagaa
gacacactgacattggagcgcaagatcaactctgggaacagacctcaagcaactactcac
gtaagaaaaggagaggatattttggtggctgaaacactagaactctcccctcttccaaaa
aaatatgaagttgattcagaaaagccggtgttcaacctggcagctgttgttgctgaaaca
cttggcctcgatgcccaggtggaatctcagtcccagagtgtatttaatcagccaagaatc
accggtgccccactttttcacgagggtgaagattcctctccacggcaagtcaaagttgaa
tttactgaaggttctatggaagagtctcagggtaacgacgatgatggatggaatacaaag
gaagcatcacctgtatttggaggacctgcgagaaacataaggagaagtgcagaaatggac
tgtatttctccccccttaccagttggattgaacagtaaattgatatcacagtgttctaga
aacccatcagattttttatttaactctgtacaggcaaaggcagaagatggagcgcaggca
actcgtctctgccttggcaaagagacagactctgtaattagccaatgttcaagcaatggg
cagggtgtcttgaggtgtagtccaaacaaatcagtccctggtggtgctcagatgggcaaa
gacattcttgacagtgagcaccataaacaaatggcaaacagatatgggaaaagaaaaaat
gcagaagcagagcaagaggagagctgtgaatcctcatttgataaagaaaacaatatccct
ataaaagacattggtagtgaaagacacagcatgctggacaagcccctggatctttctgac
cgtttttcagtgctcaggccacaggacagaagccatggcagcagcaggggtagaacaaag
cagacatttgcactggtaccagagaaacctgaccccaaaaaaccactgcacatagactta
agggaggacctttaccaccaaacaaagcagaaaaaagtatttgtttctgggttagtagaa
cgtagtgccttcaatttgcacgaagataaggaagtgacagaagaaggcaatcagcttttc
gatgatttagagattgaaactgtccatgagccaaaaagaaacgcaagatcagtgcacaga
ggtgtccagccgacatctgtccttcagccaaacttgcacatggttcaggcttgcccggaa
tctcaacaagggaagccaccaatagataacatgcagtggagcattgatccaggggctgac
ttgtcgcagtatgaaatggacatgacaatggaagattctaagggtgggagccctgcaaag
ccagagctagaggacatggattacacatatgttagtgaaagtttcctgttaaaaatgaag
aagggggatccaggtgacagtgaagatgaaagcaaaggtcaagacagctttgaaaaaatg
tttgacaagagtgagtatggagagtatgtgttgtgcattaaagacaggagcccttcccaa
agttgcaaagaaaggaatgatctgtcttccatggaaaataacaaaattaccaaagaaaaa
gagattgaaactaaaggagagacatatcagaagcagaaggcatttgtggagccatatttc
caaagacctgaacaaaaaaagcctgcaatggattttcctcacattgaagttgttcgcaaa
aaagatgagagacgaaaaatgcttgggcatacttgcaaggaatgtgaattgtactatgcc
gaccttccagaggaagagagagcaaagaagctggcttcctgctcaaggcaccggttccga
tacattccgccaagcacccctgaaaatttttgggaggtgggatttccttccacgcaaaca
tgccaagacagaggctacattaaagaagaactctctccctgccagcgtcctcgaagaaga
caaccttataatgctaaattttcatcaaagattaaagagcagaagacataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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