KEGG   Xenopus tropicalis (tropical clawed frog): 100485071
Entry
100485071         CDS       T01011                                 
Symbol
aaas
Name
(RefSeq) aladin
  KO
K14320  aladin
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100485071 (aaas)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xtr03019]
    100485071 (aaas)
Messenger RNA biogenesis [BR:xtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100485071 (aaas)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 eIF2A PD40
Other DBs
NCBI-GeneID: 100485071
NCBI-ProteinID: XP_002936677
Xenbase: XB-GENE-967146
UniProt: F6VY14
Position
2:147106974..147122467
AA seq 519 aa
MCSLDLFPPPLNGDQVPLYEYNNEMVAGTGFDNPPPSFQSALVNIPELTIPIDAVKAPGR
MELSSKTAFIHHKESIWKRCLNAWHNVGLAGFLEEMSNSKEEVPPWLCHVARCSLAVCRS
VSSLHGSLFPHLTMKSEDLTAEFSQALDWADSPLRAFAWHPHTNKFALALLDDSIRIYTA
GSPTIPTLKHRLQKDVASMAWKPMCASVLAVACQSCVLVWHVDPTSLSTRPSSGCAQVLS
HPGHSPVTSVCWSPKGGVLLSASPVDTAMLVWDVPTESCIPLQRVGGGGVTFLSWSPDGS
KVLAATPSCVFRVWETQKWTCERWPTLQGRCQTGCWSPDGSRLLFAVKGESVIYSLCFSV
SEGETQAGVGGSQSATVVADVSEVVFTTSAGEIRVGGDIQSMCWDPSGERLAVLLKGNPE
FEESQPVIAVFRTRNSPIFELLPCGFIQGRKGETPQLFQFHPGFHKGALLSELWSSGRVN
HFPFYFVNAQCPRFSPESSAVVPGNTTSIAKPRTLFTET
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgtgctcccttgatctgttccctcctcctcttaatggagatcaggtgccactttatgaa
tataacaatgagatggtggccgggacagggtttgacaatccaccgccctctttccagtct
gcgttggtaaatattccagagcttactatacctattgatgcagtgaaggctcctggccga
atggagttgtcaagtaaaacagcttttatccatcacaaagagtcgatctggaagcgctgt
ttgaatgcatggcataatgtgggacttgctggtttcctggaggagatgtctaactccaag
gaggaagttcccccctggttgtgccatgttgcacgctgttcccttgcggtgtgccgctca
gtctcctctttgcatgggtctctctttccacaccttacaatgaagagtgaggacctcact
gctgagttttctcaagctcttgactgggctgactctccattgcgtgcatttgcatggcat
ccccacacaaacaagtttgccttggctttgttagatgactccatccgaatctacacagca
ggcagcccaactatccccacactgaagcatcgcctacagaaggatgtggcaagtatggct
tggaagcccatgtgtgcatctgtccttgctgtggcctgccaaagctgtgtgctggtgtgg
cacgtggaccccacttccctatcaacaaggccttcctctggttgtgctcaggtcctatca
cacccaggccatagtccagtcaccagtgtttgctggtctcccaaaggtggagtgttgctt
tctgcctcacctgtagacactgctatgttggtctgggatgtacccacagaaagctgtata
cccctgcagcgggttgggggtggcggagttaccttcctgtcttggtctccagatggaagc
aaagttctggcagccactccatcttgtgttttcagggtgtgggagacccaaaagtggaca
tgtgagcgttggcctactttgcaaggtcgttgccagactggttgctggagccccgatgga
agtcgtcttctttttgctgtaaagggagagtctgtaatatatagtctgtgcttttctgtc
tctgagggtgaaacgcaagctggcgtaggaggcagtcagagtgccacagttgttgctgat
gtgtctgaagtcgtattcacaacttctgctggagaaatcagggttggaggggatatacag
tcgatgtgctgggaccccagtggagagaggctggcagttctactaaaaggaaatcctgag
tttgaagaaagccagccagtgattgctgtttttaggacccgcaacagtcccatttttgag
cttcttccatgtggcttcatccaaggtagaaaaggagagaccccacagctgttccagttt
catcctggttttcataaaggcgccctcctgtcagagctgtggagttcaggccgtgtcaat
catttcccattctactttgtgaatgcacagtgccctcgtttcagcccagaaagcagtgct
gtggtgccaggcaacactaccagcattgccaagcccaggacgctatttacagaaacctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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