KEGG T01011: 100486298

Xenopus tropicalis (tropical clawed frog): 100486298

Entry

100486298         CDS       T01011

Symbol

bcan

Name

(RefSeq) brevican core protein isoform X1

K06795

brevican

Organism

xtr Xenopus tropicalis (tropical clawed frog)

Brite

KEGG Orthology (KO) [BR:xtr00001]
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:xtr00535]
    100486298 (bcan)
   00536 Glycosaminoglycan binding proteins [BR:xtr00536]
    100486298 (bcan)
   04091 Lectins [BR:xtr04091]
    100486298 (bcan)
Proteoglycans [BR:xtr00535]
Extracellular matrix (ECM) proteoglycans
  Aggrecan / versican family
   100486298 (bcan)
Glycosaminoglycan binding proteins [BR:xtr00536]
Hyaluronan
  Extracellular matrix or blood plasma proteins
   100486298 (bcan)
Lectins [BR:xtr04091]
C-Type lectins
  Group 1: Proteoglycan core proteins
   100486298 (bcan)

SSDB

Motif

Pfam:

Xlink Lectin_C Sushi EGF V-set hEGF I-set Ig_3 ig Izumo-Ig

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Xenbase:

UniProt:

Position

8:132585752..132622185

AA seq 1150 aa
MEKNMRWTALLLLILAQVSISLTSALEGDSEHSKTLKVTIGSLPARPVLTGTLTIPCHIR
YHSPSEVLSVGRQAVLATPRIKWSFISNGKEEEILVARGRKVKISEGYRARALMPHYAES
GNDATLIINSLITNDSGIYRCHVQHGIEDDYDMLEVKVKGVVFLYREGTARYAYTFSMAQ
EACNRIRASIATPEQLLAAYHSGYEQCDAGWISDQTVRYPIQIPREGCYGDMDGFPGVRN
YGVLDPDDMYDVYCYVEELNGEVFLSSTPDKFTLHEAKDYCKRLGTSIATTGQLYAAWSQ
GYDQCNPGWLSDGSVRYPIVTPRERCGGNSPGVKTLFLFRNQTGFPDSMAKYDVYCFRDK
SRLAPQNLEDGQPAPAEKVQNVITLTESFQELTFPKGNAENEAQGSVDSIPLNKTKMADS
QQEPEELRETITREQESVLQESTPTVKSSTSNSFVSYPPGDVEQDKEDGKEEEIAKEDAS
FTQETSETKAAFIPQNKSVSSLLETTRSTLEESVDIPTQSVPGDSATKVVLVNIDAENDY
FYDNITNLPDEFDSEESGTLSQTVHTPTQSPKKSPETEQVLIKESEDVYNISVYATRQSE
ASPVPTDPTHSAYVTSLDNKDGGNPLPHSTGDIDDTSSGVFPTLVTPGELSISSSDAGAQ
VFEASGHGDSLFTEDLNASPKPFVGLLKQLVTSELPVSTQPPMYSVGTRLDQSTDAQTNM
LTTQVDLAMETSGQSNSQATWEEASGDGSGSLWTESSGQTTNNTQDASINTAEHSGNPTS
HPEITQSVAHSTKTFGKNPVDIQGNQETATVQISHLISSSIISTERQENIIENGLSSTAL
PNMEESSEEPSSGEATTASPVHYVPLRYTLSPPPTDNSEDSTTHIQEKTAHPNVSMSTTN
PPPAIPTERAILGASINLSDVCYPNPCGNGGTCIDEEDEDFRCLCLPGYTGKICEINVEK
CLGDWDSFQGFCYRHFHERRSWEEAETFCRDAGGHLTSIMTPEEQEFLNNKYNDYQWTGL
NDRTIEGDFQWSDGNPLLYENWAHGQPDSYFLSGENCVVMVGHNEGKWSDVPCNYHLPFV
CKMGLVSCGPPPELSNATMYGRPKSTYQINSVVGYRCQEGFLQRNSPIIRCQADGFWEEP
QLSCISNATF

NT seq 3453 nt +upstreamnt +downstreamnt
atggagaagaacatgaggtggaccgcgttgctgctcctgatacttgctcaggtgtcaata
tcgctaacttcagcactggaaggagactcagagcacagtaagactctgaaagtgacgata
ggaagccttcctgccagaccggtgctgactgggaccctcaccataccgtgtcacatcagg
taccactctccatccgaggtcctcagcgttgggcgccaagcagtgctggcaactcctaga
ataaaatggagcttcatctccaatgggaaggaggaggagatactggtggcacggggccgg
aaagttaagatcagtgagggctaccgggcccgtgccttgatgccacactacgccgagtcg
ggcaacgacgccactttaatcataaacagcctaataactaacgactcagggatctaccga
tgccatgtacagcacggtatagaagacgactacgatatgctggaggttaaagtaaaaggg
gttgtgttcctgtatcgggagggaactgcacgctacgcttatactttctctatggcgcag
gaagcatgcaacagaattagggcgagcattgccacgccggaacagcttctggctgcttat
catagtggctacgaacagtgtgatgctgggtggatttcagaccagactgtcagataccca
atccagattccaagagaaggatgctatggcgacatggatgggttccctggagtgcggaat
tatggggtgctggatccagatgacatgtatgatgtgtactgctatgttgaagaactgaat
ggtgaagtgtttttgagttcgacgcctgataaatttaccctgcatgaagcaaaggactat
tgcaaaaggctgggcacaagcattgcaaccacagggcaactctatgctgcgtggagccag
ggatacgatcagtgtaacccagggtggctctcagatggaagtgtgaggtatccaattgtc
acacccagggaaaggtgcgggggcaattctcctggtgttaaaacgctatttctgttccgt
aatcagacgggatttccagactccatggccaaatatgatgtttactgcttcagagataag
agccgacttgcaccacaaaatctggaagatggtcaacctgctccagctgagaaggtccag
aatgttatcactttaactgaaagctttcaggagttaaccttccctaaaggcaatgctgaa
aatgaagctcagggctctgtggactccataccacttaacaaaacaaagatggccgacagt
caacaggaaccagaagagctgagggaaaccattaccagggagcaagaatcagttcttcaa
gagtcaacaccaactgtaaagagttccaccagcaactcatttgtatcgtatcctcctggg
gatgtagagcaagacaaagaagatggcaaggaggaggaaatagcaaaggaagatgctagt
tttacccaagaaacctcagagaccaaggctgcgttcatcccacagaacaaatctgtctcc
tctctcctagagacgacaagaagcacgttggaggaaagtgtcgatatccctacgcagtcg
gttccaggtgactccgccacaaaagtagtccttgtaaatatagatgcggaaaatgattac
ttttatgacaatatcaccaacttgccagatgaatttgactcagaggagtcgggaacatta
agccaaacagttcatacccctacccagtcaccaaagaaaagtcctgaaactgaacaagtt
ctgattaaggagagcgaggatgtttataatatctcagtgtatgctactcggcaatctgaa
gcttctcctgttccaactgacccgacgcattctgcttatgttaccagtttggataacaaa
gatggcggtaatcctttaccgcattccacaggcgatatagatgatacaagttctggagtg
tttcctactttagttacacctggagaactttccataagtagctctgacgctggagcacag
gtttttgaagcatctggacatggggatagtttgtttacagaagatctaaatgccagtcca
aaaccctttgtgggtttattgaaacagcttgttaccagcgagttgcctgtatcaacacaa
cctcccatgtattctgtgggcaccaggctagatcagtctacggatgcacaaactaatatg
ctcacaacccaagtagatttagcaatggaaaccagtggtcagagcaactcacaagccact
tgggaggaagcaagtggggacggctctggttccttatggactgagtcaagtggacaaact
acaaacaacacacaagatgcctccattaacacagccgagcactcaggaaacccaactagc
catcctgaaataacacaaagtgtggcccattctacaaagacctttggaaagaacccagtt
gatatacagggtaaccaagagactgcaacagtacaaatatctcacctaataagttcttcc
attatctcaacagaaaggcaagaaaatatcatcgagaacggcctttcttcaacagcctta
ccaaacatggaagaaagttccgaagaacctagttcaggggaagctacgactgcatcacca
gttcattatgttcctctcaggtatactctatcgccaccacctactgataattccgaggat
tccaccactcatattcaggagaagacagcccacccaaatgtgtctatgagtacaaccaac
ccgccacctgctataccaacagagagagccattctgggagcctcaataaatctgtcagat
gtctgctacccaaacccttgtggaaatggagggacttgcattgatgaagaggacgaagac
ttccgctgcctgtgtttgccaggttatactgggaaaatctgtgaaataaatgtagagaag
tgcttgggtgactgggattcgttccagggattctgctacagacatttccatgaaagacga
agctgggaagaggcagagaccttctgccgagacgctggagggcacctaaccagtattatg
acccccgaagaacaagagtttctcaacaacaagtacaacgactatcaatggacggggctg
aacgacaggaccatagaaggggacttccagtggtcggatgggaaccccctgctgtatgag
aattgggcccacgggcagccggacagctatttcctctccggagagaactgtgtggtgatg
gtgggacacaatgagggcaaatggagcgatgtcccgtgtaattaccacctcccattcgtc
tgcaaaatgggactagtctcctgcggccctcccccagagctatccaatgccaccatgtac
gggcggccaaaatcaacctatcagatcaattcggtggtgggataccgttgccaggaaggt
tttcttcagaggaactccccaatcattaggtgccaagcggatgggttttgggaggaaccc
caactcagctgcatctccaatgccacattttaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (10)   
   Pfam (10)   
All databases (29)   

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