KEGG T01011: 100486485

Xenopus tropicalis (tropical clawed frog): 100486485

Entry

100486485         CDS       T01011

Symbol

dnajc13

Name

(RefSeq) dnaJ homolog subfamily C member 13 isoform X1

K09533

DnaJ homolog subfamily C member 13

Organism

xtr Xenopus tropicalis (tropical clawed frog)

Brite

KEGG Orthology (KO) [BR:xtr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xtr03041]
    100486485 (dnajc13)
   03110 Chaperones and folding catalysts [BR:xtr03110]
    100486485 (dnajc13)
Spliceosome [BR:xtr03041]
Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    100486485 (dnajc13)
Chaperones and folding catalysts [BR:xtr03110]
Heat shock proteins
  HSP40 / DNAJ
   100486485 (dnajc13)

SSDB

Motif

Pfam:

RME-8_N GYF_2 DnaJ CTNNBL Arm_2 MatP_C GYF DUF6813

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Xenbase:

UniProt:

Position

6:52489451..52584397

AA seq 2244 aa
MNIIRENKDLACFYTTKHSWRGKYKRVFSIGTHAITTYNPNTLEVTNQWPYGDICGISPV
GKGQGTEFALTFRKGSGKKSETLKFSTEHRTELLTEALRFRTDFSEGKITGRRYNCYKHH
WSDTRKLVTLEVTPGGIDQIDPSNNRVLCTYDYRNIEGFTEVSGYQGGFCILYGGFSRLH
LFASEQREEIIKSAIEHAGNFIGITLRTRKEPVDFEYYVSLRLGKYSNDESITSLAEFIV
QKITSRHTEPVKRLLALTETCLLERDPATYNIVTLKPLGEIFALVYDPENPQIFTVEFIK
GQIRKYSSTERDSLLASLLDGVRASGNRDVCVKMTPTQRGQRWGLLSVPVDEEVESLHLR
FLTTPPNGNFADAVFRFNANISYSGVLHAVTQDGLFSENKEKLINNAITSLLSQEGELAA
SNAELESQFQAVRRLVASKAGFLAFTQLPKFRERLGVKVVKALKRNNDGVTHAAIDMLCA
LMCPMHDDYDLRQEQLNKASLLSSKKFLENLLEKFNLHVNYGTGALVISSLLDFLTFALC
APYSETTEGQQFDMLLEMVASNGRTLFKLFQHPSMAVVKGAGLVMKAIIEEADKEIATKM
QELALSEGALPRHLHTSMFTISADQRMLTNRQLSRHLVGLWTADNTTSLNLLKRILPPGL
LAYLDSTDPVPEKDIDRMHIRDNLKIASDQYGKFNKIPEWQRIAGKAAKEVEKFAKEKVD
LVLLHWRDRMGIAQKEDRNSMNTAQKPVILRKRRQRIKIELNWDLFYYRFHQDHARSNLI
WNFKTREELRDTLEAEMRAFNVDRELGSSTVISWNHQEFEVKYDCLSEEIKIGDYYLRLL
LEEDENEENAAIKQSYEFFNELYHRFLLTPKVNMKCLCLQALSIVYGRCHEEIGPFGDTK
YIVGMLERCTDRLERDRLILFLNKLILNKKNVKDIMDSNGIRILVDLLTLAHLHTSRATV
PLQSNVIEAAPDMKRESEKEWYFGNADKERSGPYSFVEMQEFWNKGILSPKTRCWAQGMD
GWRPLQVIPQLKWCLLAAGQAVLNETDLATLILNMLITMCSYFPSRDQDNAIIRPLPKVK
RLLTDNTCLPHITQLLLTFDPILVEKVSILLYHIMQDNPQLPRFYLTGVFFFIMMYTGSN
VLPIARFLKHTHAKQAFRTEESKGPDIFQRSILGHILPEAMVCYLENYEPEKFSEIFLGE
FDTPEAIWSSEMRRLMIEKIAAHLADFSPRLQSNTRALYQYCPIPVINYPQLENELFCNI
YYLKHFCDTLKFPDWPIKDPVKLLKDTLEAWKKEVEKKPPTMSIDDAYEVLGLSRGQGQY
DESKIRKAYFRLAQKYHPDKNPEGRDMFEKVNKAYEFLCTKSKKVVDGPDPENIILILKT
QSILFNRHKEDLQPYKYAGYPMLIRTITMETSDEQLFSKVSLLPAATELAYHTVNCSALN
AEELRRENGIEVLQDGFSRCVSVLTASSKPDDMPVQVCGHICKCYSVAAQFETCREKITE
MPNIIKDLCRVLYYGKRVQRLAAMAVECVSSFAVDYWLQTHLLQAGVLWHLLAYPFNYDF
TLEESGIQKNEDTNQQEVANSLAKLSLLALSRLGGYLSGDQETPENPVLRKSLAGMLTPY
IARKLTVSSPTEILKMLNSNTESPYLLWNNGTRAELLEYLESQQESMVRRGDCDVSYGAD
FVYSEHSKELIVGDIFVRIYNEQPTFQLELPKAFAASLLDYIGSQAQYLHTLMALTQTGK
VESDQHVDRLQRVEMALEALRNVIKHNPGSETECIGHFKLLFSLLRVHGAGKVQQLALEV
VNIVTSNQDCVNNIAESMVLSSLLSLLHSLPTSRQLVLATLYALTSSTKIIKEAMAKGAL
IYLLDMFCNSTHPQVRSQTAELFAKMISDKLIGPKVRIVLMKFLPGVFMDAMRDNPEAAV
HIFEGTHENPELIWNDNSRERVSTTVREMMLEHFKQQVENPDANWKLPDDFTVAYGEAQG
ELLVGGVFLRIFIAQPAWVLRKPREFLVALLEKFTELLEKNNAHGETLETITNATVCLFS
AQPQLMDQVPPLGHLPKILQAMSHKNNAVPKCAIRVIHILTDNELCVRSLASLDTIGPLM
SGMKKRSDMIGFACEALNRMFQKEQTELVAQALKVDLVPYLLRLLEGQGLENLESPAATK
AQIVKALKSMTRSLQYGEQVNEILTRSSVWSAFKDQKHDLFISESQTAGYLTGPGVAGYL
TAGSSSTVMPIVPPPVDQEAGDLG

NT seq 6735 nt +upstreamnt +downstreamnt
atgaatataatccgggaaaataaagacttggcctgtttctatacaacaaaacattcctgg
aggggaaagtataaacgtgtgttttccattggtacacatgccataactacttacaaccct
aatactcttgaagttacaaatcagtggccttatggagatatttgtggtatcagtcctgtg
ggtaaggggcaaggaacagagtttgcgcttacatttcgtaagggcagtggaaagaaatca
gaaaccttaaaattttctacagagcacagaacagaacttcttacagaagcactacgattc
aggacagatttttctgaaggcaagatcactggaaggaggtataactgctataaacatcac
tggagtgatacacgaaagttggtcactttggaagtgactcctgggggtattgaccaaata
gatccatcaaataatcgtgtcctttgcacctatgattatcgaaatattgaaggtttcaca
gaagtctctggttatcagggaggtttttgcatcctttatggaggctttagtcgattgcat
ttatttgcaagtgagcaaagagaagaaattattaaaagtgccatagagcatgccggaaac
tttataggcataaccctacggacaaggaaggaaccagtagattttgaatattatgtaagc
cttcgtttgggaaaatacagcaatgatgaatccatcacttccttagcagaattcattgtt
caaaaaattacttcaaggcatacggagccagtgaaaagattgctagcacttactgaaact
tgcctattggaaagggacccagcaacttataatatcgtaacgctgaaaccattaggagag
atatttgcactagtatatgaccctgaaaacccccaaatttttactgtagaatttataaaa
ggacagattcgaaaatactcatcaactgaaagagattccttactggcaagtttattagat
ggtgtaagagcatctggaaatagagatgtctgtgttaagatgactccaactcagagaggc
cagcggtggggcctgttaagtgtgcctgtggatgaggaggtggagagcctgcacttaaga
tttctaaccactcctccaaatgggaactttgcagacgcagtatttagattcaatgcaaat
atctcttacagtggagtcctacacgctgtgactcaagatggcctcttctctgagaacaaa
gaaaagctgattaataatgccataacatcattactttcacaagaaggggaactggcagct
tctaatgcagaacttgaaagccagttccaggcagtcaggaggctagtggcttccaaagca
ggattccttgcctttacccagctaccaaaatttcgtgaacgccttggagtgaaagtagtc
aaagctctcaaaaggaataatgatggagtcacccatgctgctattgatatgctttgtgca
ttaatgtgtcctatgcatgatgactatgacttaaggcaagagcaactgaacaaagcatcc
cttctttcttcaaagaagtttctggaaaacttgctagaaaagtttaatttacacgtgaat
tatgggacaggcgcgttagttatcagttctcttttggacttcctcacttttgcactttgc
gctccatacagcgaaacaacagaaggtcaacagtttgatatgttactggagatggtagcc
tctaatggaaggactctctttaagctatttcagcacccttcaatggcagttgtaaaggga
gcaggattagtaatgaaggcaatcatagaggaagcagataaagaaatagcgacaaagatg
caagaactcgcactcagtgaaggtgccttgcctcgacacttgcacacttccatgtttaca
ataagcgctgaccagaggatgctaacaaacagacagctgagtagacatttagtgggcctt
tggacagctgacaacacaacatcattaaatttactgaaacgtattttgcctccgggtttg
ctggcatacctggacagcactgatcctgtccctgaaaaggatattgacagaatgcatatc
agggataatctaaaaattgcttctgaccagtatggaaaatttaacaaaattcctgaatgg
cagagaatagcaggaaaagctgctaaagaagtagaaaaatttgccaaggagaaagtagat
ttggttttattgcactggagggaccggatgggaattgcacagaaagaggacagaaatagt
atgaatactgcccaaaagcctgtcatcctccgaaaaaggcggcaaagaataaagatagaa
ttgaattgggaccttttctattatcgatttcaccaggaccatgctcgttcaaacttgatc
tggaacttcaaaaccagagaagagttaagggacacccttgaagcagaaatgagagctttt
aatgttgatagggagctcggaagctccacagtaatttcttggaaccaccaggagtttgag
gtgaaatatgattgtctatctgaagagattaaaataggagactactatctccggttactt
ttggaagaggatgaaaatgaggaaaatgcagcaataaaacaatcgtatgaattcttcaat
gaactctatcaccgttttctccttactcccaaagtgaacatgaagtgtctatgcttacaa
gccctgagtattgtatatgggaggtgccatgaggaaattggaccctttggagacactaag
tatatagttggaatgctagaaaggtgcacagatagactggagagggacaggcttatttta
ttcctgaataaactgattcttaataagaaaaatgtaaaagatattatggactccaatggt
ataaggatcctggtcgaccttctcacattggcacatcttcacaccagccgagccactgta
ccactacaaagcaatgttatagaagctgctcctgatatgaaacgagaaagtgaaaaagag
tggtattttggtaatgcagacaaggaaaggagtggaccatacagttttgttgagatgcaa
gagttctggaacaagggaatactcagcccaaaaacacgctgctgggcccagggaatggat
ggttggagacctcttcaagtaatacctcagctgaaatggtgtttgttggcagctggtcaa
gctgtattgaatgagacagatctcgctacactgatattgaatatgctcatcaccatgtgc
agttactttcccagcagagatcaggataatgctataattagaccattgccaaaggtaaag
aggctgctgacagacaacacttgccttccacacatcacgcagcttttgctgacgtttgac
cccatcctggttgagaaggtttccatattactctatcacatcatgcaagacaatccacag
ctgcctcgcttctatctcactggagtgttcttctttatcatgatgtacactggttccaac
gtgctccctatagccaggtttttgaagcatactcatgcaaaacaagctttcaggacagaa
gagagtaaagggcctgacattttccaaagaagcattcttggccatatccttcctgaagct
atggtatgctacctggaaaattatgaacctgaaaagttttctgaaattttcctgggagaa
tttgacacgcctgaagctatatggagcagtgagatgagacgtctcatgatagaaaaaatt
gctgcacacttggcagacttcagccctcgccttcagagcaacactcgagccctttatcag
tactgccctattcccgttatcaattatcctcagctggagaatgagctcttctgcaacata
tactacttgaaacacttctgtgacactctcaagtttcctgattggccaattaaggatcca
gtgaaactgctaaaggatacactggaagcatggaaaaaagaggtagaaaaaaaaccccca
acaatgtctatagatgatgcctatgaggtccttggtctttctcgaggacaaggccagtat
gatgaaagtaagataaggaaagcttacttcaggcttgctcagaaatatcacccagataaa
aacccagaaggaagggatatgtttgaaaaggttaataaagcatatgaatttctgtgcaca
aagtcaaaaaaggttgtggatggtccagatcctgaaaatatcattttaattttaaagact
cagagcattcttttcaacagacacaaagaagatcttcaaccttacaagtatgccggctac
ccaatgctcattcggaccatcaccatggagacatcagatgaacaacttttctcaaaagtg
tcccttctgcctgcagcaactgagctggcataccacactgtcaactgctcggcacttaat
gcagaagaactcagaagagagaatggcatagaggtgcttcaggatggtttttctcgttgc
gtgtcagttcttactgcctcaagtaaaccagatgatatgccagttcaggtatgtggacat
atatgcaagtgctacagtgttgctgctcagtttgaaacctgcagggagaagatcacagag
atgccaaatatcatcaaagacctttgcagagtgttgtattatggcaagagagtccagaga
ctagccgcaatggcagtggaatgcgttagctcctttgctgtagattactggttgcagacg
catttgcttcaagcaggggtcttgtggcacttacttgcatatcctttcaactatgacttt
acactagaagaaagtggcatccagaagaacgaagatactaaccaacaggaggttgctaac
agtcttgccaagctaagccttcttgccctgagccggctgggtgggtatttatctggagat
caagaaacacctgaaaacccggtactcaggaagagtttagctggaatgctgactccttac
attgccaggaaactcactgtttcatctcccacagagatccttaaaatgctcaacagtaat
acagaaagcccatatctattatggaacaatggcacaagagcagagcttctggaatatctc
gagtcccagcaggaaagcatggtcagaaggggtgattgtgatgtaagttatggggcagac
tttgtgtacagtgaacattccaaagaacttatagtaggggatatttttgtaaggatctac
aatgagcagcccactttccaacttgagcttccaaaagcatttgcagcatctttactggat
tacattgggtcacaagcacagtatctccacacactgatggctcttacccaaactggaaaa
gttgaatctgatcagcacgtagacagattgcagagggttgagatggcacttgaagctcta
agaaacgtcatcaaacacaaccctggctctgaaactgaatgcataggacattttaaatta
ttattttcattgctgcgtgtccatggtgccggaaaggttcaacaacttgcattagaggtg
gtcaatattgttaccagcaatcaagattgtgtaaataatatagcagagtcaatggtcctc
tccagcttattgtctctattgcactcattaccaacaagtcgccaacttgtccttgcaact
ctctatgccttgacatccagtacaaaaatcataaaggaggccatggcaaaaggtgcttta
atctacctattggatatgttttgcaattccactcacccacaagtaaggtcccagacagca
gagttatttgccaagatgatatccgataaactcattggtcctaaagttagaattgttcta
atgaaattcttgcctggggtgtttatggatgctatgcgtgacaacccagaagctgcagta
catatttttgaaggaacccatgaaaatcctgagctgatctggaatgataactccagggaa
agagtatctaccacagttcgtgaaatgatgttagagcactttaagcagcaggtagaaaat
ccagatgcaaactggaagttgccagatgattttactgtggcatatggagaagcccaaggg
gaactgttggtgggcggagttttcctgcgaatctttattgcacagccagcgtgggtcctt
cgcaaaccaagagaatttcttgttgcccttctggaaaaattcactgagctgctagaaaag
aacaatgctcatggtgagaccttagaaaccatcaccaatgcaacagtttgtctattcagt
gcacagcctcagttaatggaccaagtaccaccattgggtcatttacccaagattctacag
gccatgagccataagaacaatgctgttccaaagtgtgcaattagggtcatacacattctc
actgataatgagctttgtgtccgatcactggcttctttggatactattgggcctctaatg
agtggaatgaagaaacgctcggatatgattggctttgcctgtgaagctcttaacaggatg
tttcagaaagaacaaacagaactagtggcacaagctttaaaagttgacctggtcccatat
ttactaaggcttttggaaggacaaggtcttgaaaacctggaaagtcctgcagccacaaaa
gctcagattgtaaaagctcttaaatcaatgactcggagcctacagtatggagaacaggta
aatgaaatcctgactcgatcttctgtctggagtgccttcaaagatcagaaacatgacttg
ttcatttctgaatcacaaacagcaggatacctcactggacctggagttgctggctatctt
actgcaggctcctcatcgacagttatgcccatcgtaccaccaccggtggaccaggaagca
ggagatcttggctag

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (8)   
   Pfam (8)   
All databases (27)   

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