KEGG T01011: 100487663

Xenopus tropicalis (tropical clawed frog): 100487663

Entry

100487663         CDS       T01011

Symbol

ngef

Name

(RefSeq) ephexin-1 isoform X1

K07525

neuronal guanine nucleotide exchange factor

Organism

xtr Xenopus tropicalis (tropical clawed frog)

Brite

KEGG Orthology (KO) [BR:xtr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    100487663 (ngef)
Membrane trafficking [BR:xtr04131]
Others
  Rho GTPase associated proteins
   Rho guanine nucleotide exchange factors (GEFs)
    100487663 (ngef)

SSDB

Motif

Pfam:

RhoGEF SH3_1 SH3_9 PH SH3_2 SH3_16 DUF4390

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Xenbase:

UniProt:

Position

5:complement(126576896..126638982)

AA seq 691 aa
MRRFMRETLTQSRDSRMGRDALTASSVINMREPQIKNEEESEDENQMDESDSQTRHMPIR
RNSRFYRSMRVRNRHRRDRLSSREGMEIDNQTTAQQTYDGSRSIHLSVHYNPTTGPAGYR
EYLPSEDTSNPHEDSSSPSECATSNSEAPPTIYPLPSDSFKTIIDHIEFLYQEYRDKSTQ
HEIETRRLQDNYVQSAETSNNSQNTPLGSPPPIENQRANSTFSRFESSCSGFNLWQDLPD
VRKSGVLALLQPEEVKLQEAMFELLTSEASYYKSLRLVVSHFMDSERLRASLHQSEIHFI
FSNVLEVLATSERFLLALEQRFEENIVISDVCDIVYEHAEKHFVVYVTYVCNQTYQERAY
RKLLQERPEFRESVGHLETDPVCRGLPFSSFLILPFQRITRLKLLVQNILTKVEEGSERE
VSALQAHRELEKLVRACNDGVRKMSRTEQLISIEKTLEFKIKSVPIISHSRWLMKQGELQ
QMSGPRTSRTLRTKKLFRPVYLFLFNDLLLMCKPLTGERYQVFDVAARGLLRVEELEDQG
QTLANVFILKLLENAHEREFTYMLKATSQSEMKRWMTSLVPNRRTKFVSMSAKLLDCPQV
QCVHPYVSQEPDELSLDLADILNVLDKTEDGWVFGERLHDQEKGWFPRTVVEEILNPNIR
TQNLKECFRVHKPEEGSQNKDRRKMGSRTRQ

NT seq 2076 nt +upstreamnt +downstreamnt
atgaggcgttttatgagagagactctgacgcaatccagagatagcagaatgggacgagat
gctcttacagcttcttcagtcattaacatgcgtgaacctcagatcaagaatgaagaagaa
agtgaagatgaaaaccagatggacgagtctgacagtcagacccggcacatgcccatccgc
aggaactctcgattctacagatccatgagggtacggaacaggcatcggagggacagactg
agcagcagggaaggaatggaaattgataaccaaactacagcccaacagacatatgatggc
tccagaagtattcatctcagtgtgcactacaaccccactacaggccctgcagggtacagg
gaatatttgccaagtgaagacacaagcaatccccatgaagacagttcgtccccttctgag
tgtgccacttctaattcagaggcaccaccaactatttaccccttgccctcagattccttt
aaaaccattattgaccacatagagttcctttaccaggaatacagagataaatctacacag
catgagattgagactcgaaggctacaggataattatgtacaatctgctgagacctccaac
aactctcagaacacacctttgggctccccgccaccgatcgagaatcaaagggcaaactct
acatttagccggttcgagagctcctgttctggatttaacttgtggcaggacctcccggac
gtcaggaaaagtggagtgctggctctgttgcagcccgaagaagttaaactccaggaggcc
atgtttgagctgttgacctctgaagcctcgtactacaagagccttcgcttggtggtatct
cacttcatggacagtgagcgactgcgagcgtcactgcaccagtcagagattcacttcatc
ttctcaaatgtattggaggttctggccactagtgagaggttcctcctggccctggagcaa
cggtttgaggaaaacattgtgatatcagatgtgtgtgacatcgtttatgagcatgctgag
aaacattttgtcgtttatgtcacctacgtgtgcaatcagacctatcaggagagagcgtat
agaaagctccttcaggagaggccagaattccgagaatcggtgggacatttggagacagat
cctgtatgccgtgggcttcctttttcatcatttctcatccttccattccagaggatcaca
cgactcaagcttctggtgcagaatatcctgaccaaggtggaagaaggctcagagcgagaa
gtgtcagctctacaggcacaccgggagctggagaagttagtgcgtgcctgcaatgacggg
gtgaggaagatgagccgcacagagcagctgatcagcatagagaagacgcttgagtttaag
attaagtctgtccccatcatttcacactcacgctggctaatgaagcagggagagctacag
cagatgtcagggccacgtacgtcccgcactctacgcactaagaagcttttccgcccagtc
tatctcttcctattcaatgaccttctcctgatgtgcaagcctctcacaggggaacgatat
caggtgtttgatgtggctgctcggggtctgctgcgtgtagaggagctggaggatcagggc
cagacactggccaatgtcttcattctgaagcttctggagaatgcacatgaaagggaattc
acctacatgctaaaggccacctcccagagtgagatgaagcgctggatgacatcactggtt
ccaaaccgaagaaccaagtttgtctcaatgtccgcaaagcttctggactgccctcaggta
cagtgtgtccatccgtacgtttcccaggagccagatgagctgtcgctagaccttgccgat
attctcaacgtcctggataaaacggaagacggttgggttttcggagagcgtttgcatgac
caggagaaaggctggttcccccgcaccgttgtagaagaaatactgaaccccaatatccgg
acacagaacctcaaggaatgttttcgggtgcacaaacctgaggaaggcagccagaacaaa
gaccgacggaagatgggaagcagaacacggcagtga

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (7)   
   Pfam (7)   
All databases (22)   

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