KEGG   Xenopus tropicalis (tropical clawed frog): 100487734
Entry
100487734         CDS       T01011                                 
Symbol
herc6
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC6 isoform X1
  KO
K22372  E3 ISG15--protein ligase [EC:2.3.2.-]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xtr04121]
    100487734 (herc6)
Ubiquitin system [BR:xtr04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   100487734 (herc6)
SSDB
Motif
Pfam: RCC1 HECT RCC1_2
Other DBs
NCBI-GeneID: 100487734
NCBI-ProteinID: XP_031759089
Xenbase: XB-GENE-968556
UniProt: A0A803JAR2
Position
1:complement(79061502..79095414)
AA seq 1030 aa
MYCWGDNCFGQLALLQGEKEVVHFKENDYFQSQECVQKVSCGEKHTLYLLEDGTLLSCGQ
NPYGQLGRKSNNSSIEQISSLEAQTIVDISCGTNHSVAVSDEGSIYSWGDGSEGQLGTGN
LSSRNFTPKKITGLFNTKIIQISCGNFHSLALSEDGRVFSWGQNKCGQLGLGSQIINQAT
PQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAWGKNNAGQLGFKSDPMKAGTFKPHAVN
SLRNLGVAYISCGEEHTAVLSKDGSVYTFGDDTHGQLGQNSGNQTSVPQKIEDYAGQVSQ
VACGRYHTLLYVFSCNRIVSFGKGSLRPQDNTECSDEAELPSEFDISSLVPTNDLRDVYV
KWIFAGNNVGFAVPFSQQEATKRTLLSDTFKPILRLDLPTIKKWMKAQTGSEEYQIAKRE
ICTIFSSPACFTAGFVNRSSSNTSSASSIVDLGVASKLFTELIKDRRISDIICSSIRNDL
IPELESLPLLYEAFAIFLLLPECPLLHDLSICLSVVVALAKAINNMGESSLKILGTLWSH
MQASSMTKQIQLLKIAVILSIQGIQAEPGTKDLLQMLKKLYKANLKGNCIVPINAFCMNE
LCPLIILPLDVNNWRLWQSQPEPDENAFPAIYCRFPFVFNFPTKVQALHLDSMRKRNNEK
FQAQEQLVRNRLQGISDLPNIPLLHLILRRGHLLEDTLHKLSIVEDPNLKKDLLVEFQGE
STTDSAAVTKEFFLVLLESMVNPDYGMFSCSDPLLPIWFPSTPLVEKKKYFYFGIICGLA
VYNQIVIYLPFPLALFKKLLGKKATLEDLKELQPTMGRTMKDLLDAESTVVESMETYFCF
SWDNKSIDLIPNGGSVQVNNLNKKDFVNKCIDYIFNTSVMVPFEEFKRGFYKVCDKEIIS
FFQPDELMALVAGTTEYDWNIFEKTTMYLGKFTPDHPTIRMFWKVFHALSLVNKKGFLMF
LTGNDKLPIFTRGGDNIRMKISSFGVPDETHLPEAQTCFHMLFLPEYSNIKSLKQKLMLA
IAHNKGYEKI
NT seq 3093 nt   +upstreamnt  +downstreamnt
atgtactgctggggtgacaactgctttgggcagctagctttattgcaaggggaaaaagaa
gtggtgcattttaaagaaaatgattattttcaaagccaggaatgtgttcagaaagtgtcc
tgcggtgaaaagcataccctttacctgctggaagatggtactctgctttcctgtggccaa
aatccctatgggcaattgggcagaaaaagcaacaacagtagcattgaacaaatcagttca
ttggaggcccaaaccattgtagacataagttgtgggacaaatcattcagtggcagtgagc
gatgaaggcagtatatattcgtggggtgatggatcagaaggtcaacttggaacaggaaac
cttagttcaagaaactttacacccaaaaaaataactggacttttcaacacaaaaataata
caaatatcatgtggaaatttccattcacttgctctttctgaagatggaagagtattttca
tggggacagaataaatgtggtcagcttggcttgggcagccagatcattaatcaagctact
cctcagcttgtgaagtctcttaaagggatcccattggttcaggtgactgctggtggttcc
caaagctttgctctctccatgtcaggaactgtttttgcatggggaaagaataatgccgga
caacttggttttaaaagtgacccaatgaaagcaggcacctttaaaccacatgctgtgaat
tcattaagaaaccttggagttgcctatattagctgtggtgaagaacatactgctgttctg
agtaaggatggcagtgtgtatacatttggagatgatactcatgggcagctggggcaaaac
tctgggaaccaaacgtcagtccctcagaaaatagaagattatgctggacaagtttcccag
gttgcttgtggaaggtaccacactctgctatatgtcttctcttgcaaccgcattgtctca
tttggaaaaggctcactaagaccacaagacaatactgaatgcagtgacgaagcagaactg
ccttcagaatttgacatcagtagtttggttccaacaaatgatttaagagatgtttatgtg
aaatggatctttgcaggaaataatgtcggttttgcagttcccttttctcaacaagaggcc
actaaaagaactttattaagtgacacttttaaacccattcttcgacttgaccttcctaca
attaaaaagtggatgaaagcacaaactggaagtgaagaataccaaatagctaaacgggaa
atatgcacaattttttcttcacccgcttgctttacagctggttttgtaaaccgcagctct
tccaacacttcctcagcatcttcaatagttgaccttggggttgcatctaaattatttaca
gagttaatcaaagacaggaggatttctgatattatatgttcttcaattcgaaatgatctc
attccagaacttgagtctctccctttgctttatgaggcatttgctatattcctcctactt
ccagaatgtcccttactgcatgacctaagtatttgtctgtcagtggtggttgcacttgct
aaggctatcaacaacatgggtgaaagttctctgaagatattaggaacattgtggtcacac
atgcaagcatcctccatgacaaagcaaatccagttacttaaaattgctgtgatattatct
atacaaggtattcaagcagaacctggaactaaagatctcctacagatgctaaagaagcta
tacaaggctaacttgaagggcaattgcattgtaccaattaatgcattctgcatgaatgaa
ctttgcccattgattatacttcctttagatgtgaacaactggcgtctatggcagtctcaa
cctgagcctgatgaaaatgcctttcctgctatatattgccgttttccatttgtctttaat
tttcccacaaaggtccaagcacttcacttggattcaatgcggaaaagaaataatgaaaaa
tttcaggcacaagaacaacttgtgcggaacagactgcagggaattagcgaccttccaaat
atacctctgttacatctcatcttacgacgtggccacttgttagaagatacattacataag
ctaagtattgtggaagacccaaacctgaagaaagacctactggttgaatttcaaggtgaa
agcacaacggattctgcagcagtcacaaaagagtttttcctggttctgttagaaagtatg
gttaatcctgattatggcatgttcagctgttctgatccattattacccatatggttccca
agtactccattagtggaaaagaaaaagtacttctactttggcataatatgcggcctagca
gtctataaccagatagttatttaccttccctttcccttggcactgtttaaaaagcttttg
ggtaaaaaagcaactttggaagatttgaaagaactacaaccaaccatgggaaggaccatg
aaggatttactggatgcagagagtacagttgtagagagtatggaaacatatttttgtttt
tcctgggacaataaatccattgacttgatacccaacggaggatcagtacaggtcaacaat
ttaaataagaaagattttgttaacaagtgtattgactacatattcaacacatccgtaatg
gtaccatttgaggagttcaagagagggttttacaaggtctgcgataaagaaatcatttca
ttctttcagccagatgagctaatggctcttgttgctgggactacagaatatgactggaac
atttttgaaaagactaccatgtatcttggcaagttcacacctgatcacccaactatcagg
atgttttggaaggttttccatgcactgtccctggtgaacaagaagggttttctgatgttt
ctcaccggaaatgacaagctccccatatttacaagaggtggagacaacataaggatgaag
atctctagttttggagttcctgatgaaacacaccttccggaagcacagacctgctttcac
atgttatttcttccagaatattccaacataaagtctctcaaacaaaagctgatgttggct
atagcccataacaagggatatgaaaagatctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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