KEGG   Xenopus tropicalis (tropical clawed frog): 100488113
Entry
100488113         CDS       T01011                                 
Symbol
phc1
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
  KO
K11456  polyhomeotic-like protein 1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    100488113 (phc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xtr03036]
    100488113 (phc1)
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     100488113 (phc1)
SSDB
Motif
Pfam: PHC2_SAM_assoc zf-FCS_1 SAM_1 SAM_2 SAM_PNT zf-CGNR
Other DBs
NCBI-GeneID: 100488113
NCBI-ProteinID: XP_031761253
Xenbase: XB-GENE-1013248
UniProt: F6TCW7
Position
7:7976881..7994580
AA seq 852 aa
METESEQNSSSTNGSSASGSSTRPQISQMSLYERQAVQALQALHRQPNAAQYFHQLMLQQ
QLSNAQLHSLAAVQQATIAASRQAASPNTGSAQQTNTTQGSQANLSTSSSAQLLSRTQNV
TAPSATTLTQSVLLSNASSPPLGQSQTQMYLRQPQLGNLLQVNRSLGRGVPLNSQLILMP
NGSVAVQQEVTSPQNQGVHQDSDQVQNLAVRGQQTAATTSAAGATISQPAPLATKPQIHP
ASSAAPTQIPSPNVPQSVKNPVGSTGGTVSQGSQTEAEGRKADGEGVQQSVGINLTRAAT
PAPNQTLISSATYTHIQPHSVLQQKQVVFQQQIAIHQHRQSQLLHASTHLQLAQPQAATQ
QGLQTPGTQQTLVVQPMLQATSESAIPTKAPVPIQPKQPGKGVPPLNLQGHLGAKASQGT
RPLPIPSPSQPHIPVQLVGARQQGPAQALALGATQVPSQASSMTQLTLPPSPAPVASVVA
GAVQESQAGFYGVLQGKLSGPGKRKAEVEDDRDDPSVLPVKASPPTDAPPTVEETSTPAD
KPEAATQVSPTLTVLAPTSVPALSISSRQHSDSKPPQAIVKPQILTHIIEGFVIQEGAEP
FPVGSPQLLKEPEKQAASDTVLLPPAESPPPQAVGDTAASDSGSSKLLKCEYCGKYAPAE
QFRGSKRFCSMTCAKRYNVSCSHQFRLKRKKLKELQEAGGVRARRRGPRRNSSEIARAKI
QGKRMREDSSRGSDNSSYDEAFSPNSPAPPSCRTPHGDRDGSTPTGGPSNSDLLGINPMF
LSSNPSRWSVEEVYEFISSLQGCQDLAEDFRSQEIDGQALLLLKEEHLMSALNIKLGPAL
KICAKINLLKET
NT seq 2559 nt   +upstreamnt  +downstreamnt
atggaaacagagagtgaacagaactccagctcaaccaatgggagctcagcgtcggggagc
agtacgcgccctcagatatcccagatgtccctgtatgaacggcaagctgtacaggccctg
caagctctccacagacagcccaatgctgctcagtattttcaccagttgatgctacaacag
cagctgagtaatgcgcaactacacagcctggcagccgttcagcaagcaaccatagctgcc
agtcggcaggccgcatcccctaacacaggctccgcccagcaaacgaacaccacccaggga
tcgcaggctaacctttccacaagctcttcagcccagctcctgagccgtacccagaatgtc
accgcccccagcgccactaccctcacacagtcagtgttgcttagtaatgccagctcgccg
cctcttggccagtcacagacacagatgtacctgcgccagccacagctagggaaccttcta
caggtcaaccggtctcttgggcgtggggttccactgaactcgcagctcattttaatgccc
aatgggtcagtagctgtccagcaggaggtgacatctccccagaaccaaggagtgcatcag
gactcggatcaagttcagaatcttgctgttcggggccaacagactgcggcaactacttca
gcagcaggagctacaatctcccagccagctcctctggctaccaaaccccaaatccaccca
gcctcctcagccgcaccgacacaaattccatctccgaatgtgccacagagtgtaaagaac
cctgtagggtccacagggggtacagtgagtcaggggagtcagactgaggcagaggggcga
aaagctgatggagaaggggtacagcaaagcgttggaatcaacctcactagagcggcaaca
ccagctcctaaccagactctcatcagctccgccacgtacactcacatccagccgcactcg
gtgctgcagcagaagcaagtggtctttcagcagcagattgctatccatcagcacagacag
tcgcagctgctccatgcttctactcacctccagctcgctcagccccaggctgccacccag
caaggcctacagacccctggaacccaacaaaccctggtggtgcaaccgatgctgcaggca
actagcgagtctgctatccccactaaagctcctgtacccatccagcccaagcagcccggc
aaaggcgtgcctcccctaaatcttcaaggtcacctgggggctaaagcgtcccaaggcacc
aggccccttcctataccttcccccagccagcctcatatccccgtacagctggtgggtgcc
agacagcaaggcccggcccaggcattagccttgggggccactcaagttccctcacaagca
tcctccatgacacagttgactctgcccccttctcctgcccctgttgcttctgtggtggcc
ggcgcagtgcaggaaagccaagctgggttttatggagttctgcagggaaaactatctggt
ccagggaagaggaaggcagaggtagaggatgacagggacgatccctctgtgctgcctgtc
aaagcatctccgcccactgacgcccccccaactgttgaggagaccagcaccccagccgat
aagccagaggccgccacccaggtctcccccacccttacggttttggctcccaccagtgtc
cctgccctgtcaatatcttcccggcagcatagcgactccaagcctccccaggccattgtc
aagccgcagatcctgacacacatcattgagggttttgtaatccaggagggggcggagcct
ttccctgtaggcagccctcaactgcttaaggagcctgagaagcaggctgcatccgacact
gttctactacccccggcagagagtcccccgccacaggctgtgggagatacagcagccagc
gattctggaagctccaagctcttaaaatgcgagtactgtggaaagtacgcccctgccgag
cagttccgtggatccaaaagattctgttccatgacttgtgccaaaagatataacgtcagc
tgtagccaccagttccggctgaaacgaaagaaactgaaggagctgcaggaagcaggaggg
gtgagagctcgaaggcgcggccctcgcaggaacagctccgagatcgcacgagccaagatc
caagggaagaggatgcgggaggattccagcagggggtccgacaattccagctacgacgaa
gccttctctcccaactctcctgccccgccatcttgcagaacgccacacggtgacagagat
gggagcacgcccacgggtggaccctccaactcagaccttctgggcatcaatcccatgttc
ctctccagtaaccccagccgctggagtgtcgaggaggtgtacgagttcatctcatctctg
caaggttgccaagacttagccgaggacttccgctcccaagagatcgacgggcaggcatta
ctgctgctgaaggaggagcatctcatgagcgcccttaacattaaattaggacctgcgcta
aaaatctgcgccaaaatcaacctgctcaaggagacctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (6)   
   Pfam (6)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system