KEGG T01011: 100488898

Xenopus tropicalis (tropical clawed frog): 100488898

Entry

100488898         CDS       T01011

Symbol

chm

Name

(RefSeq) rab proteins geranylgeranyltransferase component A 1

K23460

Rab proteins geranylgeranyltransferase component A

Organism

xtr Xenopus tropicalis (tropical clawed frog)

Brite

KEGG Orthology (KO) [BR:xtr00001]
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:xtr01006]
    100488898 (chm)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    100488898 (chm)
Prenyltransferases [BR:xtr01006]
Protein prenylation
  Rab geranylgeranyltransferase
   100488898 (chm)
Membrane trafficking [BR:xtr04131]
Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    100488898 (chm)
Endosome - Lysosome transport
  Rab GTPases and associated proteins
    100488898 (chm)

SSDB

Motif

Pfam:

GDI NAD_binding_8 Salp15 FAD_oxidored

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Xenbase:

UniProt:

Position

8:63002352..63084502

AA seq 641 aa
MADDLPTEFDVVILGTGLPESIIAAACTRIGQRVLHIDARNYYGGNWASFTFSGLQTWIE
NCKQELNTELAAACKGQALDNEEIIPFNKRNQTIQNIEVFCYSSTEDGEAVEEAGALNIN
SALLTTVTSSDGQENSSIDISKNHTSTEQNDSPEGRSDLEEATNSDQRSADSTLETGTIV
EVEPSLTQAIQQDSPKTITYSQIVKEGRRFNVDLVSKFLYSRGLLIELLIKSNVSRYTEF
KNVTRILTYHNGKIEQVPCSRADVFASKQLSMVEKRILMKFLMHYIDYELHPEDYQDYEN
STFLEFLKSKQLTPTLQHFVLYSIAMVPENAKTIEGLKAMQHFLRCLGRYGNTPFLFPMY
GLGEIPQCFCRMCAVFGGVYCLHHSLECLVVDGDSKLCKAVIDHRGKRVDCKYVIVEDSY
LPEQICANVSYKQISRAVLITDCSILNTESNQEISVLTFPPADKGQTAVYITELCSSTMT
CMKNTYLVHLTCSSTKPTAKEDLEPVVQQLFTLSTENDIEANDRTKPKVLWALYFNMRDS
SGVPRQSYAGLPPNVYVCSGPDHCFGNDHAVQQAENLFHELYPSEEFCPPAPNPEDIIYD
GECAQQEPSESSIPVDSKAEASAENETVVESYEDSEAQKAE

NT seq 1926 nt +upstreamnt +downstreamnt
atggcggatgatctgcctacggagtttgatgttgtcatcctcgggactggcctacccgag
tccatcattgctgctgcatgcaccagaattggacaacgggttcttcatatagatgcgagg
aattactatggtgggaattgggccagctttacattttcagggttacagacctggattgaa
aactgtaagcaagaactgaacactgaattagctgcagcatgtaagggtcaagccttagac
aatgaagaaataattccattcaacaagagaaaccaaactattcagaacattgaggtcttc
tgttactccagtactgaagatggagaagctgtagaagaagccggagcacttaacataaac
tctgcactactaaccactgttaccagttcagatggtcaagaaaactcctctatagatatt
agtaaaaatcacacatcaacagaacaaaatgacagtcctgaaggaagaagtgatttggaa
gaggcaaccaatagtgaccaaaggtcagcagattctactctggagactggtaccatagta
gaggtggaaccatccctaacccaggccatccagcaggactcgcctaaaaccattacctat
tcccagattgtgaaagaaggaagaagatttaatgttgatttagtgtcaaagtttctgtat
tctcgaggactgttaattgagcttctcatcaaatcaaatgttagccgttacactgagttt
aagaatgtcacccggattttaacttatcacaatggcaaaattgagcaggtaccttgttca
agagcagatgtatttgctagtaaacaactttccatggtagaaaagaggatattgatgaaa
tttctaatgcactacatagactatgagcttcaccctgaagactatcaagattatgaaaat
tcaacttttttagagtttttaaagtccaaacagttgactccaactttgcagcactttgtt
ctgtactccattgcgatggtgccagaaaatgccaaaaccatagaagggttgaaagcaatg
caacatttccttaggtgccttggacgatatggcaatactccttttctcttccctatgtat
ggcttgggagagattcctcagtgcttctgcaggatgtgtgccgtattcggaggagtctat
tgtcttcaccattcgctggagtgcctagtagttgatggagattcaaagctgtgtaaagct
gtcattgaccatagaggtaaacgagtagactgcaaatacgtgattgtggaggatagctac
cttcctgagcagatctgtgcaaatgtatcatacaaacaaatctccagagcagtccttatt
acagactgttctatactgaacacggaatccaaccaagagatttcagtcttaacatttcca
ccagcagacaaaggacaaactgctgtgtacataactgaactctgctcttcaacgatgact
tgcatgaaaaacacataccttgtccatcttacatgttcatccacaaaaccaacagccaaa
gaagatctggaaccggttgtacagcaattatttactctgagcacagagaacgatattgaa
gcaaatgaccgtacaaaaccaaaagttctttgggctctgtattttaacatgagggattcc
tctggtgtaccacgtcagtcttacgctggacttcccccaaatgtgtatgtttgcagtggg
ccagaccattgctttggaaatgatcatgcggttcaacaggcagaaaatctattccatgag
ctttacccaagtgaggaattctgcccgccagctccaaacccagaagacattatctatgat
ggagagtgtgctcagcaagaaccaagtgaatctagcatacctgtagactcaaaagcagaa
gcttctgctgaaaatgaaactgtagtagaatcatatgaagactcagaagcacagaaggca
gaatag

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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