KEGG   Xenopus tropicalis (tropical clawed frog): 100489259
Entry
100489259         CDS       T01011                                 
Symbol
msln
Name
(RefSeq) mesothelin
  KO
K20733  mesothelin
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    100489259 (msln)
Membrane trafficking [BR:xtr04131]
 Endocytosis
  Others
   Others
    100489259 (msln)
SSDB
Motif
Pfam: Mesothelin
Other DBs
NCBI-GeneID: 100489259
NCBI-ProteinID: XP_031748734
UniProt: A0A803JRD5
Position
9:complement(16367636..16409618)
AA seq 1676 aa
MGVPLKSALLLTSLLVTLSSAANNTCPPSSVNETALCANINSNFSDLSDPCLWTFEDYAC
TPVANFSTFSPDLLLNMTACANNSGLVNDTQYSILFFSKLTNNNSAAMLSSLTGQFGNVS
KEWKRFLLAGIWPTIMQNVNSSGPASGSPPQLIPRYIQPFLPYLSAPMMQCLVDKKAPCS
SIQEVVQGIGAVDPGLAITNGKDLFPVLKSLLNVRQNLSGNACSQNANSSIWLASTLGKF
AQFADYNDFVSLNPNFSALAVLSSLTVPQVVSFSLQSNSANNSNDVGQMMGILQNSADVQ
NFLTNLNSAAMNMSSIPRPLAQGLMNKTFQLLVPSLNLSSSSDWAGLFQNNLKSLLPEIT
TDQLKLLPQNFSCDSFQSVMKAMDSDFNQLKNVKQEDVYKVVIQPYLKNNASACSQNVNT
STWVTQNFGKFIQFAPYNDLIALNPNFSALDVLSNLAMSQVASFSLGSVAANNTNAVGQI
MALYQNPGDVQSFLATINSAAALNNLSTIPHPLAQGLINKTFQALVPSLSSSNSSDWTGL
FQDKLKFVLPEITTDQLKVLPQNFSCDSFQTVIKSMDSTFNQLKNVKQEDVYKVLIQPYL
KNNGSACSKNVNSSTWIKANFGKYSQFADYTSLVNLNPNFNALDVLSSLTVPQVVSFSLA
PQAGNNPSAVGQIVGLLQNTNDAYNFLAQINSAATSNNMTSIPSPLAQGLLAKTFQTLTP
QINNLTSSDWSSLFQDKLSLLLPQISQDQLSLIPKNISCDSFQAVTKGLISAYPKLTADK
QQSAYGSFIKPYLNNNGQGTPKCYNQSDPNSGSWLMNNLGNFMTLTSQTDLLTFANQSIL
QMFASNPATAQFASQLSLDKDTAIFFTTLLTSGGNVNLSSIPTNLLCFLTPQAFQNMSSS
DILDSTQKINQACAKNQTQGPSAPTAEELQVSISLVSKLNNFTTATLSNLGQTAVGLSQS
QISGIKDSDLKNALPSLSGVSGWNYGQSKSIINKLLNSGYQVTNLESLGSLVVGLPSQQL
MGLDPSMILNASKNAQFASQMSSAPTSLQTVFVAKILTAGSKPEDVVKSIPSAMAVLIPK
SRLAFKPVLDDINNKAWTPDQAAMFFDNVVPAQSVLSNISASVLQGYTCGSNNKMSASQV
QLLAKAMYLNNAILSEDQLNCLAKPIVKISSDADMASYPKEIYLFASPPNNTNATSCRTF
YTNVGSANISILSAYSKSQKNFLPKALSCLNVTGFALTSDQIQVLGQIACDLNGTYIENS
DSSLISQLPQCSSLTDDQKASIIKVISQGKSPYGQPSTWSKSTLVSLKGIMGFANKDILT
NISNTVLVSWIKDAPGLKRNQLATIVKTLYPTRARRAVSCTVGQITADNVKDNSLPLSYP
TDQLDACLSNQTLTDFLQDLGSKPFTNGQLIVLKSRLDQIYPSGYPETVLTTLGAIANVC
SEVDVAKWNITSVDTLESLLSNDLATNLVQAVINKFVAGNALNASALNIIGSPNICLLNS
TQLGSVTPSAIGDAKPLNVNPCNQSVKNQLYGVANTSFQSMISDSSSYFNLKKPYLGGAP
AADLQYLASKNVSMDIGTFINLNVNSVLGLSVGDMKGLLGSNVADLKAQENNTIVSTWTR
SQSQSALDLLGIGLTGGRADATTAASVTTKKVGSSAGAVVLSHSVLVAGLIAFLLC
NT seq 5031 nt   +upstreamnt  +downstreamnt
atgggggttccgctaaaaagtgccctacttctcacaagccttctggttactctgtcttcc
gctgccaacaacacttgtccccccagctctgttaatgaaacagcgctgtgtgccaacatc
aacagcaacttttcagacctttcagacccatgcctatggacatttgaagactatgcctgc
acaccagtggccaatttcagtaccttttcccctgatctgctgctgaatatgactgcctgt
gccaacaacagcggactggtcaatgacactcagtattccatcttgtttttctcaaagctg
accaataacaactcagcggctatgctctccagcctaactgggcagtttgggaatgtgagc
aaagaatggaagcgtttcctgctggcaggcatctggcccactattatgcagaacgtaaac
agcagcggccctgctagtgggtccccccctcagctgatcccaagatacattcaaccgttc
ctgccataccttagcgcaccaatgatgcagtgtctggtggataagaaagcgccatgttcc
agcatccaggaagtggtgcagggtatcggtgccgtagaccctggtttggcaattactaat
gggaaagacctgtttccagtactcaagtcattattaaatgttcggcagaatttatcaggc
aatgcctgctcacagaatgccaactccagcatctggctggcaagcacccttgggaaattt
gctcagtttgcagactacaatgactttgtcagccttaaccctaacttcagtgctttggct
gtattgtctagcctgacagtgccccaagtggtgagcttcagcctgcagtcaaattccgca
aacaactctaatgacgttggccagatgatgggaatactgcagaattctgctgatgtccaa
aacttcctgactaacctcaattcagctgcaatgaacatgagctccattccacgccctcta
gcgcagggtctgatgaacaaaacttttcaactcctggttcccagtcttaacctctccagc
agctctgattgggcagggcttttccaaaataacctgaaatctcttctgcctgaaatcaca
acagaccagctcaagctcctgccccagaacttctcttgtgactccttccaatctgtaatg
aaagcaatggactccgacttcaaccagctgaaaaatgtaaaacaggaggatgtttacaaa
gtcgtcattcaaccgtatctcaaaaacaatgcttcagcctgctcacagaatgtcaacacc
agtacctgggtcacgcagaactttgggaaattcatacagtttgcaccgtacaatgacttg
attgccttaaatcctaatttcagcgcactggatgtactgtcaaacctagcaatgtcccag
gtggcaagcttcagcctggggtcagttgctgcaaacaacaccaatgctgtggggcaaata
atggcactatatcagaaccctggggatgtccaaagcttcctggctacaatcaactcagcg
gctgctctaaataatctgagcaccattccacaccctctggctcagggtctgatcaacaaa
actttccaagctttggttccaagcctctcatcctccaacagctctgattggacagggctg
ttccaggataaactgaagtttgttctacctgaaatcacaacagaccagctcaaggttcta
ccccagaacttctcttgtgactccttccaaactgtaatcaaatcaatggactctacattc
aaccaactgaaaaatgtaaaacaagaagatgtttacaaagttctcatccaaccttatctc
aaaaataatggttcagcctgctcaaagaatgttaacagcagcacatggatcaaggccaac
tttgggaaatattctcaatttgcagactacacgtccttggttaacttaaatcccaacttc
aatgcgttggacgtgttgtcttcgctcacagtgccacaagtggtcagcttcagtttggcg
ccacaggctggaaataaccctagtgccgtagggcagattgtagggttactgcagaacacc
aacgatgcctacaacttcctggcccagataaattctgcagctacatcgaataatatgacc
tccataccttctcctctagctcaggggcttctagctaaaaccttccagaccctaaccccc
caaataaataacttaactagttctgactggtcatcactgttccaagataaactgagcctt
cttctgcctcaaatctcgcaagatcaactcagtctcatcccaaagaacatctcctgtgac
tccttccaagcagtaaccaaaggtttgatctcggcttacccaaaattgacagcagacaaa
cagcaatctgcctatggatccttcattaagccatatctgaataataatggtcaagggaca
ccaaaatgctacaaccaaagtgatcccaactctggatcctggcttatgaacaacttaggc
aacttcatgacactgacaagccagactgatctgttaacttttgcaaatcaaagcatactg
cagatgttcgccagcaacccagccactgcccagtttgccagccagctcagcctggataag
gacaccgccattttctttaccacactcctgacctcaggcgggaatgtcaatctgagcagt
atcccgactaatctcctgtgcttcctgacaccacaagcttttcagaatatgagcagttct
gatattcttgacagcacccagaaaatcaaccaggcctgtgctaaaaaccagacccaaggt
ccttccgccccaacagctgaggaattacaggtctcaatttctcttgtcagcaagctgaac
aactttacaacggccactctcagtaatctaggccaaactgccgtcggactctcacagtcc
caaatcagtggcattaaggacagtgatctcaagaacgctctgccttctctcagcggtgtg
tccggctggaattatggacaatctaagtcaataatcaataagctgctcaattccggttac
caggtcaccaatttagaaagcttaggcagcttggtggttgggcttccaagtcagcagctc
atgggtttggatccaagtatgattttaaacgcatccaaaaatgcccagtttgcaagccag
atgtccagtgctcctacttctctgcagaccgtttttgttgcaaagattctaaccgcaggt
tccaagccagaagatgttgtcaaaagtattcccagtgcaatggccgtactcattcccaaa
tcccgacttgccttcaagcctgttctggatgacattaacaacaaagcctggaccccagat
caggccgccatgttttttgacaatgttgtgcctgcccaatccgtcttatccaatatctct
gcctcggttttgcaagggtatacctgcggctcaaacaacaaaatgagtgctagccaagtt
cagctgttggcaaaggctatgtatttaaataacgccattctttcagaggaccagttgaac
tgcctagccaagccgatcgtcaaaattagctctgatgcagacatggccagctatccaaaa
gaaatatatctgtttgccagccctccgaacaatacgaatgcaacatcctgtagaaccttc
tataccaatgtcggttcggcaaacatcagcatcctttcagcctattccaagagccaaaag
aatttcctgccaaaggccttgtcctgtctgaatgtgacagggttcgcccttaccagcgac
caaatccaggtgctcggacaaatagcttgcgacctgaatgggacttacattgaaaattcc
gacagcagtctgattagccagctgccccagtgctcgtccctcactgatgaccagaaagct
tccattattaaagtgatcagccaggggaagtcaccgtatgggcaaccatccacttggtca
aaatcaacactggtatcccttaagggaatcatgggctttgctaacaaggacatcctcaca
aatatttccaatactgtcttagtatcttggataaaagatgcccctggcctgaaaaggaat
cagctcgcaactattgtcaagaccttatatcccactagggcacgccgagcagtcagctgc
acagttgggcagatcacagcagataatgttaaggataacagcctcccgctgtcttaccct
accgaccaattagacgcttgcttgtcaaaccaaacgctgaccgatttcctacaagacctg
ggcagcaagccgttcacgaacggtcagctcatcgttctaaagagcagactcgatcagatc
tatcccagcggatacccagagacagtgcttaccacactcggagccatcgccaacgtctgc
tctgaagtagatgtcgcaaagtggaacatcacctcagtcgatactctggaaagtttacta
agcaacgatctagccaccaacctggttcaagccgttattaataaattcgttgctggaaac
gcactgaacgcttctgcattgaacatcatcggcagtccgaacatttgccttctaaacagc
acccaattgggcagcgtcaccccaagtgccatcggagatgccaaaccattaaatgtcaac
ccatgtaatcagtcagtgaagaaccagctgtacggtgttgccaatacatccttccaaagt
atgatcagtgactcgtcttcttactttaacctcaagaaaccatatctaggtggggcacca
gctgcagatctgcaatacctcgcttccaaaaatgttagcatggacatcggaacattcata
aacttaaatgtaaactcagtgctgggtctatcagtcggtgatatgaaaggcctgcttgga
agcaacgtagctgatctaaaggctcaggaaaacaacacaattgtaagcacttggaccaga
tctcagagccagtcagccctggacctgcttgggattgggctcaccggaggcagagccgac
gccaccacagctgcttcagtgaccactaagaaagttggttcttctgctggagcggttgtc
ctttcccattctgtcctcgtcgctggtctgatcgccttcctcctctgctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (30)   

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