KEGG   Xenopus tropicalis (tropical clawed frog): 100489328
Entry
100489328         CDS       T01011                                 
Symbol
lrp6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
  KO
K03068  low density lipoprotein receptor-related protein 5/6
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04150  mTOR signaling pathway
xtr04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    100489328 (lrp6)
   04150 mTOR signaling pathway
    100489328 (lrp6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    100489328 (lrp6)
Membrane trafficking [BR:xtr04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Low-density lipoprotein receptor (LDLR) family proteins
    100489328 (lrp6)
SSDB
Motif
Pfam: Ldl_recept_b FXa_inhibition Ldl_recept_a DUF5050 SGL EGF cEGF Podoplanin
Other DBs
NCBI-GeneID: 100489328
NCBI-ProteinID: XP_031754428
Xenbase: XB-GENE-481820
UniProt: A0A6I8SHK9
Position
3:complement(8210425..8275711)
AA seq 1612 aa
MGALLRSLLICSLSCLLRASPLLLYANRRDLRLVDAAGMKGNSTVVVSGLEDAAAVDFVF
FRGLIYWSDVSEEAIKRIDFNKTGSSHDVVISGLLSPDGLACDWLGEKLYWTDSETNRIE
VSNLDGSLRKVLFWQELDQPRAIALDPTRGYMYWTDWGDVPKIERAGMDGSLRSVIIDSD
IYWPNGLTLDYDEQKLYWADAKLSFIHKANLDGSHRQTVIKGSLAHPFALTLFGDTIYWT
DWTTRSILACNKYTGEDRREVDSDIFSPMDIHVFSRLRQPNATNPCAVHNGGCSHLCLMS
PMEPFYQCACPTGVRLMEDGKMCMHGATELLLLVRRTDLRRISLDTPDFTDIVLPLDDIR
HAIAIDYDPVEGYIYWTDDEVRAIRRTQIDGSSSQYIVTSQVAHPDGIAVDWVARNLYWT
DTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPMNGYMYWTDWGEIPKIERAAMDGSD
RIILVNTSLGWPNGLALDYAEGKIYWGDAKTDKIEVMTTDGTGRRVLVEDKLPHIFGFTL
LGDYVYWTDWQRRSIERVHKRTGEREVIIDQLPDLMGLKATNIHKMSGTNGCAENNGGCS
HLCLFRPQGPRCACPIGLELISDMKTCIVPEAFLLFSRRADIRRISLETSNSHVAIPLTG
VKEASALDFDVTDNRIYWTDVSLKTISRAFMNGSALEHVVQFGLDYPEGMAVDWLGKNLY
WADTGTNRIEVSKLDGQHRQILVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRTAMDG
SGRITLVPDVGRANGLTIDYAERRLYWTDLDTNLIESSNMLGLDRVVIADDLPHPFGLTQ
YQDYIYWTDWSQRSIERANKTSGQNRTMIQNDLDYVMDILVFHSSRQAGWNECASSNGHC
SHLCLATPVSGYTCGCPVHHSLNADNKTCSPPSSFLLFSQKNAINRMVIDEQQSPDIILP
IHNLRNVRAIDYDPLEKQLYWIDSRQNIRRAQEDGSQSMTVVASTVPNQNIDMQPYDLSI
DVYSRLIYWTCEATNVINVTRLDGRAIGVVLKGEQDRPRAILVNPERGYMYFTNLQERSP
KIERAALDGTEREVLFFTGLSKPVALALDNKMGKLFWADSDLRRIESSDLSGGHRIVLED
SNVLQPVGLTVFGNHLYWIDRQQQMIERIEKTGRVGRTKIQARIPLLTDIHAVTELSMDE
YKEHPCSQDNGGCSHICIVKGDGTTRCSCPMHLVLLQEDELSCGEPPTCSPLQFTCFTGE
VDCIPAEWRCDGFTECEDHSDEQNCPMCSDTQYQCASGQCIDSSLRCNGEANCQDKSDEK
NCNEVCAPDQFHCGSGQCIGKHRRCDLSPDCSDSSDEQACYPTEEPPPPSTNTIGSIIGV
ILTVFVVGGVYFICQRVLCRRMKGDGETMANDYVVHGPASVPLAYVPHPSSLTGSLPGMS
RGKSVISSLSIMAGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATERSHYTM
EFGYSSNSPSTHRSYSYRPYSYRHFAPPTTPCSTDVCDSDYTPSHRITSAAAKGYTSDLN
YDSEPVPPPPTPRSQYLSAEENYESCPPSPYTERSYSHHLYPPPPSPCTDSS
NT seq 4839 nt   +upstreamnt  +downstreamnt
atgggggccctgctgaggagcctgctcatctgcagcctgagctgcttactgagggcatct
ccgttactgctctatgccaatcgccgtgacctgcgactggtggacgctgccggaatgaag
gggaactccactgttgtggtcagcggcttggaagatgcagccgctgttgactttgtcttt
ttccgcggcctgatatactggagcgacgtgagcgaagaagcaatcaaaaggattgatttt
aacaaaactggtagctcgcacgacgttgtgataagcggtttactttcgccagacggactg
gcttgcgattggctcggagaaaaactttactggaccgactcggaaacaaatcggattgag
gtttccaatctggatgggtcgctgcggaaagtgttattttggcaggagctggatcagcct
cgagcaattgcacttgatcctacccgagggtatatgtactggacagactggggagacgtg
ccaaagatcgagcgagccggaatggatggctctttgcgttctgtcataatagattccgac
atttactggccgaacgggctgacgctggactatgatgaacagaaactatactgggcagac
gccaagctgagctttatccacaaggccaacctggatggatcccatcggcaaacggttatt
aaaggttctcttgctcatcccttcgccctgactctatttggggacaccatctactggaca
gactggaccacccgctccatcctggcctgtaacaagtacactggagaggaccggcgagag
gtggattcggacattttctcccccatggacatccatgtttttagccgtctgagacagcca
aacgccacaaatccctgcgcagtacacaacgggggttgctctcatttatgcctaatgtct
cccatggagccgttttatcagtgcgcttgtcccacaggtgtgcgcctcatggaggacggg
aagatgtgcatgcatggtgctacagagttgctgctgcttgtccgcaggacggacctcagg
cgaatatcgctggacactccggacttcacagatattgttttgccactggacgatattcgc
cacgctattgccattgactatgatcctgtagaagggtacatttactggacggacgacgag
gtgagagccatacgccgcacacagatcgatggctcttccagtcaatacattgtcacctcc
caagtggcccatccggatggtatcgctgttgattgggtggctcggaacttgtactggacc
gacacggggacggaccgcattgaagtcactcggctgaatgggactatgcgcaagatcctc
atatccgaggacctggatgaaccacgagccatagtgctagatcctatgaatgggtacatg
tattggactgattggggagaaatccctaaaattgagcgtgctgcaatggatggctcagac
aggattatattagtgaacacctcacttggttggcccaatggtctggcactggattatgca
gaagggaaaatctactggggagatgccaagaccgataagatagaggttatgacaacagat
ggcacaggcaggcgagttctggtggaagacaagctgccccatattttcggcttcacactt
ctgggcgattatgtgtattggactgactggcagagacgcagcattgaaagggttcacaag
cgtacaggagagcgcgaggtcattatagaccagctgcctgatctcatggggctgaaagcc
accaacatacataaaatgtctggtacaaatggctgtgctgaaaacaatggcggctgcagt
cacctttgcctgttccggccgcaaggacctcgctgtgcctgccctatcggcttggaactg
atcagtgacatgaaaacctgcatcgtccccgaagcttttctcctgttctcccgcagagct
gacattcgccgtatatccctggagactagtaatagccatgtagccatacccctgactgga
gtgaaagaagcctcggctctcgattttgacgtcacggacaatagaatctattggacagac
gtcagtctaaagacaatcagtagagcgttcatgaatggcagtgcccttgaacatgtggta
cagttcggcctggattatccagaaggaatggcagtggattggttggggaaaaatctatac
tgggcggatactggtactaaccgtattgaggtatcgaagttggatggacagcacagacag
atcctagtttggaaagacctcgacagcccaagggctcttgcattggatccagcagaaggg
tttatgtactggactgagtggggtggaaaaccaaagattgacaggaccgccatggatgga
agtgggcgcatcactctggtgccggatgtcggccgggccaacgggctgacaattgactat
gcggagaggcggctttactggacggatctggatactaatcttattgaatcttcaaatatg
ctggggttggaccgggtagtgattgccgacgacttgccccacccctttgggttaacccag
taccaggactatatctactggacagactggagccaacggagtattgagagagccaacaag
accagcgggcagaatcggaccatgatccagaatgacctggactacgtcatggacatccta
gtatttcactcttcccggcaggccggttggaacgagtgtgcctccagcaatggtcactgt
tctcatctatgcttggccacacctgtcagcggctatacctgtgggtgcccggtacaccac
tcgttgaatgcggacaacaaaacctgcagtcctccaagttccttcctgctcttcagtcag
aaaaatgccataaaccgcatggtgatcgatgagcagcagagtcccgacatcatcctgccc
attcacaacctacgcaacgtccgagccatcgactacgaccctttggagaagcagctctac
tggattgactcgcggcagaatatacgccgggctcaggaagatggcagccagagcatgacc
gtagtggcaagcaccgtccccaaccagaatatagacatgcagccgtacgatttgagcatc
gatgtctacagtcgcctgatttactggacctgcgaagccaccaatgtcatcaacgtcacg
cggctggacgggagagccatcggggtggttctaaagggagaacaagaccgtcccagagct
atccttgtgaatccagagagagggtacatgtatttcaccaacctccaggagcgatcgcca
aaaatcgaaagagctgctcttgatgggacagagcgagaggtgctgtttttcaccggcctg
agcaaaccagtggcgcttgcgctcgacaacaaaatggggaaacttttctgggccgactct
gacttgaggaggatcgaaagcagtgacctatccggtggccatcgcatagttctagaagat
tctaacgtgctgcagccagtcggactcactgtttttggcaatcacctgtattggattgac
cggcaacaacaaatgattgagcgcattgagaaaaccggacgcgtgggtcgcaccaagatc
caagctcgtatccctctgctgactgatatccatgctgtgacagaactgagcatggacgaa
tacaaggaacacccttgttcccaggataacgggggctgctcccacatctgcatagtgaaa
ggagatggaaccacccgctgttcttgcccgatgcaccttgtccttctgcaggaagatgag
ttgtcctgtggggagcctcctacctgctctcccctgcagttcacctgtttcaccggcgag
gttgattgcatcccggcggaatggcgctgcgacggctttacagaatgcgaggatcacagc
gacgagcagaactgccccatgtgctcggacacgcagtaccagtgcgccagcggccagtgc
attgactcctctctgcgctgtaacggagaagccaactgtcaggacaagtctgatgagaaa
aactgcaatgaagtctgtgctccagaccagttccactgtggcagcggacagtgcatcggg
aagcacaggcgttgtgacctcagcccggactgcagtgacagctcagacgagcaagcttgc
tatcccacagaggaaccacctcctccatcgaccaacaccatcggctccatcatcggcgtg
atcctcaccgtattcgtagtagggggagtgtattttatctgtcagcgagtgctgtgtcgt
cgcatgaaaggagacggggagaccatggccaacgattatgtggtgcatggacccgcctcc
gtccccttagcatacgtgccacatccgagctccctgactggatccttgcctgggatgtct
cgtgggaaatctgttatcagctctctcagcattatggctggaagcagcgggccaccgtat
gaccgggctcatgtgaccggagcctcatccagcagctcctccagcactaaaggaacctat
ttcccaccgatcttgaacccacctccctccccagccacggagcgttcccattacacaatg
gaatttggttactcctcaaacagtccttccacccacagatcatacagctacagaccctac
agctaccggcattttgcccctcctacaactccctgcagcaccgacgtgtgcgacagcgac
tacacccccagccaccggatcacctccgccgcggcgaagggctacaccagcgatctcaac
tacgactcggaaccggtgcctccgcctccaaccccccgcagccagtacctttcagccgag
gagaactacgaaagctgcccgccctctccctacacggaacgaagctactctcaccacctt
tacccccctcctccgtcaccttgtacagactcttcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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